Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02009 ATGACTTGTTTCCCATTCTCATTTGGTAAGAAAGCACGATTTGTGGCAAAACATGATCCAGATATTGATGAAGTACTCTCAGGTATTCAAAATGTAAGGATATATACCTACAAAGAACTAAAAGTTGCCTCTGACAATTTCAGTCCAGCCAATAAAATTGGGGAGGGTGGATTTGGTTCAGTTTATAAGGGATTGCTAAAAGACGGGAAAGTAGCTGCCATAAAAGTACTTTCAGCAGAATCAAGTCAAGGGGTAAAGGAATTTGTGACAGAGATTAATATGATCTCAGAAATAGAGCATGAAAATTTGGTTCAGCTATATGGTTGTTGTGTGGAAGGGAATCAACGGATTTTGGTCTACAATTATCTTGAGAACAATAGCCTTGAACAAACCCTTCTGGGTTCAGGTCACAGTAATATCATTTTTGATTGGAAAACACGATCTAGGATTTGCATTGGGATTGCACGTGGGCTTGCTTATCTTCATGAAGAAGTAAGACCACATATTGTTCACAGAGATATAAAAGCAAGCAATATTCTCCTTGACAAAAACCTTACACCCAAAATTTCAGATTTTGGTCTTGCAAAGCTTATTCCATCATACATGACTCATGTCAGCACACGTGTGGTGGGAACAATAGGTTATTTGGCTCCAGAGTATGCAATAAGAGGGCAGCTGACACGCAAAGCAGATATTTACAGCTTTGGTGTCCTCCTTGTGGAGATAGTTAGTGGAAGATGTCACACAAATACACGATTACCAATAGGAGAGCAATATCTTTTAGAAACGACATGGGAACTTTATCAGAAAAGAGAATTGGTAGGGCTGGTAGACATGTCACTAGACGGCCATTTCGATGTCGAGGAGGCATGTAAGTTTCTGAAAATTGGACTTCTTTGCACTCAGGACACGTCGAAGCTCCGGCCAACCATGTCATCTGTGGTGAAGATGCTCACTGGAGAAAACGATATTGATGAAAGTAAGATAACAAAGCCAAGCTTTATTTCAGATTTTATGAATCTTAAAATCAGAGGAGAAAAAGGTGGTGATATTGATACCAAGGTTTCATCTTCCTACAATGCATCCTCTGCCTCAGACAGCCACAGCAATACCATGTCATATGCTGCAAGTACAACTACAACCACAACCTTCACCGGGAAATATGATCAAAGTTTGTAA 1179 0.3953 MTCFPFSFGKKARFVAKHDPDIDEVLSGIQNVRIYTYKELKVASDNFSPANKIGEGGFGSVYKGLLKDGKVAAIKVLSAESSQGVKEFVTEINMISEIEHENLVQLYGCCVEGNQRILVYNYLENNSLEQTLLGSGHSNIIFDWKTRSRICIGIARGLAYLHEEVRPHIVHRDIKASNILLDKNLTPKISDFGLAKLIPSYMTHVSTRVVGTIGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRCHTNTRLPIGEQYLLETTWELYQKRELVGLVDMSLDGHFDVEEACKFLKIGLLCTQDTSKLRPTMSSVVKMLTGENDIDESKITKPSFISDFMNLKIRGEKGGDIDTKVSSSYNASSASDSHSNTMSYAASTTTTTTFTGKYDQSL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02009 392 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02009 392 CDD STKc_IRAK 53 320 - -
Gma15g02009 392 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02009 392 SUPERFAMILY Protein kinase-like (PK-like) 25 318 IPR011009 -
Gma15g02009 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Gma15g02009 392 Gene3D Transferase(Phosphotransferase) domain 1 123 334 - -
Gma15g02009 392 PANTHER - 2 373 - -
Gma15g02009 392 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Gma15g02009 392 Pfam Protein kinase domain 50 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02009 392 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Gma15g02009 392 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02009 Gma-Chr15 33774736 33779920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02009 14 321 Receptor kinase-like Gene Family AT1G53430 55.663 4.02e-110 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma15g02009 Pkinase 8.8e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02009 15 33774736 33779920 Gma13g02361 13 38366705 38379640 PCT