Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02008 ATGTGGAATGAAGAAAGCGATTGGATCGGTTCCTTTGATGCTCTGTTGGCGAGGTTGGCCGAGTGCAGCATGTGTTCGCGCCGAAGTGGGGAGCGCCCCGGTGCGGCGCAGATGGACGTGAAGATATTGGATGTGGCGGCGGAGGGCGGCTACGGGCGGGTGTTCCGGTGCCTCGACGTCCACACGGGCGCCCTCGTGGCCATGAAGCAGATCACGATGGTCAGGTTGAGCCAGGGCATTCCGGCGCAGATCATCCGGGAAGTGTCGCTCCTCAGAGAGCTCCACCACGCCAACATCGTGAAGCTGCTCAGGGTAGGGTTCACAGAGAACAGGTACGTCAACCTCGTCTTCGAGCATCTCGATTACGACCTTCATCAGTTCATTGTCAACCGAGGTTACCCCAAGGATGCCACCACTGTGAAGAGTTTCATGTTCCAGATACTCTCTGCTGTGGCTTACTGTCACTCGCGGAAGGTTCTGCACAGAGATTTGAAACCAAGCAATGTACTGATCAATCATTCCAAAAGGTTGATCAAACTAGCAGATTTCGGTTTGGCTAGAGAGTTTGCAGATGACTTTTTATATACTGAGAAGTTAGGAACTTCCTGGTATAGGGCACCTGAAATATTGTGCCACTCCAGACAATATTCAACTCAAGTTGATTTGTGGTCTGTTGGCTGCATATTTGCTGAGATGGTAATTGGACAACCTTTATTCCAAGTAATTAATTGCCGGGATGAATTGGAGGGGATTTTCAAATTGTTAGGTACCCCCACAGAGGAAACATGGCCAGGAATCACTAAATTAATGCCTAACCTTCATATCTACTGCTCCAAATTTGATCCATTGGGCCTGGAAACATTTGTTACTGATCTGGAACCAAGTGGCCTGAATCTACTATCAATGATGCTATGCTTGGACCCAAGTAAAAGGATTTCTGCGGAAGCTTCTCTAAAGCATGCTTACTTTACAGATGTGAATTGGatttag 990 0.4848 MWNEESDWIGSFDALLARLAECSMCSRRSGERPGAAQMDVKILDVAAEGGYGRVFRCLDVHTGALVAMKQITMVRLSQGIPAQIIREVSLLRELHHANIVKLLRVGFTENRYVNLVFEHLDYDLHQFIVNRGYPKDATTVKSFMFQILSAVAYCHSRKVLHRDLKPSNVLINHSKRLIKLADFGLAREFADDFLYTEKLGTSWYRAPEILCHSRQYSTQVDLWSVGCIFAEMVIGQPLFQVINCRDELEGIFKLLGTPTEETWPGITKLMPNLHIYCSKFDPLGLETFVTDLEPSGLNLLSMMLCLDPSKRISAEASLKHAYFTDVNWI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02008 329 ProSiteProfiles Protein kinase domain profile. 40 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02008 329 Gene3D Transferase(Phosphotransferase) domain 1 120 323 - -
Gma15g02008 329 Pfam Protein kinase domain 48 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02008 329 PANTHER CYCLIN-DEPENDENT KINASE 18 327 - -
Gma15g02008 329 CDD STKc_CDK_like 48 323 - -
Gma15g02008 329 Gene3D Phosphorylase Kinase; domain 1 42 119 - -
Gma15g02008 329 SUPERFAMILY Protein kinase-like (PK-like) 42 328 IPR011009 -
Gma15g02008 329 PANTHER CELL DIVISION PROTEIN KINASE 18 327 - -
Gma15g02008 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Gma15g02008 329 SMART serkin_6 40 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02008 Gma-Chr15 33769145 33772745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02008 47 327 Core Cell Cycle Gene Families AT3G48750 48.763 1.26e-90 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Gma15g02008 Pkinase 9.5e-68 CL0016