Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01996 ATGGAAATATCAAATGATTCAGGTACTAAGAAACCTAAAAGGCTGACATCTGTTGTCTGGAATCACTTTGAAAGGATTAGAAAGGCGGACATCTGCTATGCTGTTTGTGTGCATTGTAACAAGAAACTTAGTGGATCAAGTAACAGTGGAACTACTCATCTGAGAAATCACTTGATGCGGTGTCTGAAAAGATCAAACTTTGACGTGTCTCAACTACTTGCAGCAAAGAGAAGGAAAAAAGATAATACCATCAGCCTAGCAAACATTGGATTTGATGAAGGTCAGAGGAAAGAAGAATATATAAAGCCAACAATCATCAAGTTTGAACCAGAGCATAAGAAAGATGAAATCATTAACTTTGGAAGTAGTAAATTTGATCAGGAAAGGAGTCAACTTGATCTTGCGCGCATGACCATATTACATGGATACCCACTGAGCTTGGTTGAACAAGTAGGATTCAAGGTCTTTGTGAAGAACCTCCAGCCTCTCTTTGAGTTCATGCCAAACAGTGATGTAGAGATTTCTTGTATCGATATCTACAGGAGGGAGAAAGAGAAAGTGTTTGATATGATAAACAGACTACATGGTAGGATTAATCTATCTATTGAAATGTGGTCTTCAACAGAAAATTCCTTGTATTTGTGTTTATCTGCTCATTATATTGATGAGGAATGGACATTACAAAAGAAAATCCTTAACTTCGTCACACTTGATTCTTCTCATACTGAAGACTTACTTCCAGAAGTGATTATCAAATGTCTCAATGAATGGGATATTGACCACAAGCTTTTTGCCGTGACACTTGATGATTGTTCCATCGATGATGACATCACTCTTAGAATCAAGGAGCGAGTTTCCGAGAAAAGGCCTTTTTTAAGTACTCGGCAATTACTTGATGTACGCTCTGCAGCACATCTCGTAAATTCCATTGCTCAAGATGCCATGGATGCATTACATGAGGTGATCCAAAAGATTCGAGAGAGCATCAGATATATTAGAAGTTCACAAGTAGTGCAAGGAAAATTTAATGAAATTGCTCAACGTGCTAGGATTAACACTCAAAAGTTCTTATTTCTTGATTTTCCAGTTCAGTGGAAGTCTACATATCTCATGCTTGAAACTGCACTAGAATACAGGAGTGCCTTTTCTCTCTTCCAAGAACACGATCCCTCCTATTCAGCAAGTCTAACTGACGAAGAGTGGGAATGGGCTAGTTCTGTTACTGGCTACTTAAAACTTTTAGTTGAAATTACGAATGTATTTTCAGGCAACAAATTTCCTACAGCGAATATATACTTCCCTGAGATTTGTGATGTCCATATGCAATTAATTGACTGGTGCAGAAGTTCAGATGATTTTCTTAGTCCCATGGCTTTGAAGATGAAGGCTAAATTTGACAGGTACTGGAGCAAGTGCAGTTTAGCTTTAGCTGTAGCCGCAGTCCTAGATCCTAGGTTTAAAATGAAGTTGGTCGAGTACTACTACTCTCTAATTTATGGCAGCACTGCTCTGGAGCGTATCAAGGAAGTTTCTGATGGTATCAAAGAACTTTTTAATGCGTATTCTATCTGTTCAACTATGATTGATCAAGGCTCAGCCTTGCCTGGCAGCAGTTTACCTAGTACTTGTGGTTCCAGAGATAGGCTAAAAGGCTTTGACAGATTCCTTCATGAGACATCACAGAGTCAGTCTATCATATCAGACTTAGACAAGTACTTAGAAGAACCAATCTTTCCACGCAATTCCGATTTTAACATATTGAACTGGTGGAAAGTCCACATGCCAAGGTACCCAATTTTGTCTATGATGGCACGTGATGTTCTTGGGACTCCAATGTCAACTCTGGCGCCAGAATTGGCATTTAGCACTGGGGGCAGAGTGCTAGATTCTTCTCGTAGTTCACTAAACCCGGACACGCGAGAGGCTTTGATATGCACCCAAGATTGGCTCCAAAATGAATCTGGAAATCTAAATCCATCTCCAATCCATTCTGCTCTACCTCTTCTCATCGAATGA 2016 0.3948 MEISNDSGTKKPKRLTSVVWNHFERIRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKRSNFDVSQLLAAKRRKKDNTISLANIGFDEGQRKEEYIKPTIIKFEPEHKKDEIINFGSSKFDQERSQLDLARMTILHGYPLSLVEQVGFKVFVKNLQPLFEFMPNSDVEISCIDIYRREKEKVFDMINRLHGRINLSIEMWSSTENSLYLCLSAHYIDEEWTLQKKILNFVTLDSSHTEDLLPEVIIKCLNEWDIDHKLFAVTLDDCSIDDDITLRIKERVSEKRPFLSTRQLLDVRSAAHLVNSIAQDAMDALHEVIQKIRESIRYIRSSQVVQGKFNEIAQRARINTQKFLFLDFPVQWKSTYLMLETALEYRSAFSLFQEHDPSYSASLTDEEWEWASSVTGYLKLLVEITNVFSGNKFPTANIYFPEICDVHMQLIDWCRSSDDFLSPMALKMKAKFDRYWSKCSLALAVAAVLDPRFKMKLVEYYYSLIYGSTALERIKEVSDGIKELFNAYSICSTMIDQGSALPGSSLPSTCGSRDRLKGFDRFLHETSQSQSIISDLDKYLEEPIFPRNSDFNILNWWKVHMPRYPILSMMARDVLGTPMSTLAPELAFSTGGRVLDSSRSSLNPDTREALICTQDWLQNESGNLNPSPIHSALPLLIE 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01996 671 Pfam Domain of unknown function (DUF4413) 422 521 IPR025525 GO:0003677
Gma15g01996 671 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 6 653 - -
Gma15g01996 671 Pfam BED zinc finger 17 60 IPR003656 GO:0003677
Gma15g01996 671 SMART bed5 14 64 - -
Gma15g01996 671 SUPERFAMILY Ribonuclease H-like 192 652 IPR012337 -
Gma15g01996 671 Pfam hAT family C-terminal dimerisation region 568 650 IPR008906 GO:0046983
Gma15g01996 671 ProSiteProfiles Zinc finger BED-type profile. 14 69 IPR003656 GO:0003677
Gma15g01996 671 SUPERFAMILY beta-beta-alpha zinc fingers 17 64 IPR036236 -
Gma15g01996 671 PANTHER BED FINGER-RELATED 6 653 IPR045259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01996 Gma-Chr15 33275572 33279444 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01996 15 33275572 33279444 Gma15g01996 15 33275572 33279444 ECH
Gma15g01996 15 33275572 33279444 Gma09g00941 09 17962392 17966578 GST
Gma17g01145 17 9969456 9973121 Gma15g01996 15 33275572 33279444 PCT
Gma05g00132 05 1342144 1345412 Gma15g01996 15 33275572 33279444 PCT
Gma15g01996 15 33275572 33279444 Gma17g01145 17 9969456 9973121 PCT
Gma15g01996 15 33275572 33279444 Gma05g00132 05 1342144 1345412 PCT