Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01989 ATGGCGCTGCTGTGTGGTTCAACTTCCGTGACTCCATTCCTTTCTCACAAGAACGTTGGTTTCACAACCTCAGCAAAATCTTCCTTTGTTGGCTTTCAATTGCCGCTTCCAAAGCTCACATTATCTTCTTCCGTTCGAACCCTTCTGCCGGCAACATCCCGTGTCCGTTGCCAGCAAGAGTCTACTACTGTTACCCCTGTCGCAGAAGAAGACCCGCGCTTCGCGTGCGTCGAACCCGAACCCCGATTCAAAGGCCCGGACATTTGGAACAAGAGCTGGTATCCAAAAGCTGCAGATCATGTGAATACAGAAAAAACATGGTATGTTGTTGATGCTACAGACAAAGTTCTTGGAAGACTAGCATCGACGATTGCTATTCACATCCGAGGGAAAAACTTGGCAACCTACACACCCAGTGTGGACATGGGTGCGTTTGTAattgtgGTAAATGCAGAAAAGGTTGCTGTATCTGGGAAAAAGAGGACCCAAAAGCTTTACAGGAGGCACTCTGGACGACCTGGTGGTATGACCGTGGAGACATTTGCCCAGCTGCAAAACAGAATTCCTGAAAGAATTATTGAACACGCTGTTCGTGGCATGCTTCCAAAAGGAAGGCTTGGGAGGAGACTATTCACCCACCTTAAGGTTTATAAAGGCCCAGATCATCCACATGCGGCGCAGAAGCCCGTTGAGTTGCCAATAAGGGATAAGAGAATACATTTGCAGAAATAG 732 0.4754 MALLCGSTSVTPFLSHKNVGFTTSAKSSFVGFQLPLPKLTLSSSVRTLLPATSRVRCQQESTTVTPVAEEDPRFACVEPEPRFKGPDIWNKSWYPKAADHVNTEKTWYVVDATDKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFAQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGPDHPHAAQKPVELPIRDKRIHLQK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01989 243 CDD Ribosomal_L13 107 220 IPR005822 GO:0003735|GO:0005840|GO:0006412
Gma15g01989 243 Hamap 50S ribosomal protein L13 [rplM]. 107 233 IPR005822 GO:0003735|GO:0005840|GO:0006412
Gma15g01989 243 Gene3D Ribosomal protein L13 96 239 IPR036899 GO:0003735|GO:0005840|GO:0006412
Gma15g01989 243 PANTHER RIBOSOMAL PROTEIN L13 62 242 IPR005822 GO:0003735|GO:0005840|GO:0006412
Gma15g01989 243 PANTHER 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC-LIKE 62 242 - -
Gma15g01989 243 Pfam Ribosomal protein L13 105 223 IPR005822 GO:0003735|GO:0005840|GO:0006412
Gma15g01989 243 ProSitePatterns Ribosomal protein L13 signature. 197 219 IPR023563 GO:0003735|GO:0005840|GO:0006412
Gma15g01989 243 SUPERFAMILY Ribosomal protein L13 101 235 IPR036899 GO:0003735|GO:0005840|GO:0006412
Gma15g01989 243 TIGRFAM rplM_bact: ribosomal protein uL13 101 232 IPR005823 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01989 109 242 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 31.852 4.19e-07 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01989 15 32587140 32590693 Gma15g01989 15 32587140 32590693 ECH