Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01294 ATGGCGGAGGAGAAAAGAGAAGAGGAAGTAGCGCACCCCAACAACTCATCATCCACCACCATGCCATTTTCCGATGAGATTCCCAACAACAACAACTTGATGATGACTTTCCCTTTCCAAGTACCACCCACCATCTTCGACGTCATGATGATGCCTTCGTCTTCTTCTTCCTTCATTGACCTGCTCGGCGTGCAGGACTACAACGCGCCGTTATTCGATTGCCTTCCCGGCGGCGGATACCGCCCTGCGCCGTCTCCGGCGAGCTCCAACGTCCCAGACTCCTCCGAGGTGTTGAACACGCCGGCTGCGTCGCCTAATTTGTCGTCGATTTCGTCGTCGTCGAATGAGGCTACGGTCAATAACAACGCCGAACAGAGTTTGAAACCTGGGAATGACCAAGAAGAAGCAGAAGCAGAGGAAGAAGGTGGTAATGGAGGCAGAGGAGATGACCAAGATCAAGACAAGACTAAGAAACAGCTGAAACCGAAGAAGAAGAACCAAAAGAAGCAAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAGGTTGATCACCTAGACGATGGTTATAAGTGGCGCAAGTACGGCCAAAAAGCTGTGAAGAACAGCCCTTATCCCAGGAGCTACTACCGTTGCACCAGCGCGGGTTGCGGCGTTAAGAAGCGCGTGGAGCGTTCCTCCGACGACCCTTCCGTCGTTGTTACAACCTACGAAGGGCAGCACAGGCACCCGTGCCCTGCTTCGGCACGGGCTAGCTTCGGCTTTGTGTCCGAACCCAGCAGCTTCGGATACGCCGGTTCGTTTGGTCCCTCACACTTTATGCTGCCACATCAGCACCACCAGCAAGAACAATCTTCGGCTTTGATATATAATAACTCCACCACCCCTCCTTTGAATGTTGTTAGCTCCAGTAGTACTAGTAACTACATGAACACGACGTCGTTTGGTGGATTTGTTCAGGATCACCCGAACCGTCATGGTTTTGGGCATGAGGCTTTGTTGAGGGACAATGGGCTTCTTCAGGACATTATTGTGCCAACTCAGGTGAGGAAGGAGGAGAAGGATTGA 1068 0.5197 MAEEKREEEVAHPNNSSSTTMPFSDEIPNNNNLMMTFPFQVPPTIFDVMMMPSSSSSFIDLLGVQDYNAPLFDCLPGGGYRPAPSPASSNVPDSSEVLNTPAASPNLSSISSSSNEATVNNNAEQSLKPGNDQEEAEAEEEGGNGGRGDDQDQDKTKKQLKPKKKNQKKQREPRFAFMTKSEVDHLDDGYKWRKYGQKAVKNSPYPRSYYRCTSAGCGVKKRVERSSDDPSVVVTTYEGQHRHPCPASARASFGFVSEPSSFGYAGSFGPSHFMLPHQHHQQEQSSALIYNNSTTPPLNVVSSSSTSNYMNTTSFGGFVQDHPNRHGFGHEALLRDNGLLQDIIVPTQVRKEEKD 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01294 355 Pfam WRKY DNA -binding domain 187 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01294 355 SMART WRKY_cls 186 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01294 355 Gene3D WRKY domain 170 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01294 355 MobiDBLite consensus disorder prediction 82 174 - -
Gma15g01294 355 MobiDBLite consensus disorder prediction 13 27 - -
Gma15g01294 355 ProSiteProfiles WRKY domain profile. 181 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01294 355 MobiDBLite consensus disorder prediction 1 27 - -
Gma15g01294 355 SUPERFAMILY WRKY DNA-binding domain 178 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01294 355 MobiDBLite consensus disorder prediction 140 159 - -
Gma15g01294 355 MobiDBLite consensus disorder prediction 87 129 - -
Gma15g01294 355 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 81 346 - -
Gma15g01294 355 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 346 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01294 Gma-Chr15 11439022 11441703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01294 93 352 WRKY Transcription Factor Family AT5G49520 49.442 2.47e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma15g01294 WRKY 2.1e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01294 15 11439022 11441703 Gma15g01294 15 11439022 11441703 ECH
Gma15g01294 15 11439022 11441703 Gma09g00307 09 2892701 2894263 GST
Gma15g01294 15 11439022 11441703 Gma17g00330 17 2640244 2642569 PCT