Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00720 ATGTCGGCTAACTGTGAGAAAATGGTAGCCATCCCTCCAACGACCAACCAATGGCTACAGGTGGATGATCACAAGGTCTTGATGGGTTCCAATGGTGGAAGTAGTAACAATAATAAGGTAATGGAAAAACCAGGTCAAAATCAACTTGTGCAGCAGCAGCAACATCCAGAAACCCTCAAGTGCCCTCGTTGTGACTCATCAAACACCAAGTTCTGCTACTACAACAACTACAGTTTGTCTCAGCCTAGACACTTCTGCAAAGCCTGCAAGCGCTATTGGACAAGAGGTGGAACCCTCAGAAACGTTCCTGTTGGTGGAGGCTGCAGAAGAAACAAGCGTGTAAAGCGTCCAATAACAAGCCCTTGTTCTGCCGCCATTGACACTGCTTCTAATTCTTCTAACTCTTCTTCTGCTCCCACTGCTGCTGCTTCACTACAACCCCAGATCGACACTGCTTCAACCTCAAATCACATCAACCCTTTGTTCTATGGATTACCAAGTAGCTCTAGCGATGTGAATCTTCCATTGTTCTCTAGGTTCGGTTCTAGAATCTCCAGTTCCGGGTTTGATCTTCAGTTGAATAATGCCCTTGGATTAGGTTTTTCATCCGGGGTTTTGTCCAATGAAGCTAGTGATAATAACGGTTACAGAAGCGGGTTTGGTTCAAACAATATGCTTCTTTCAAGTTATACATCCACTACTACTACTACTCCAGCTATGTCTTCTCTTTTGCTTCAACAGAAGTTCATCAGTGGTGGATTGAAAAATGATGCTGATAGCAGCAACACTTTCCAGCATGGCTTAAGCTTAACCTCACTAGAGCAGTTGCAAATAGCAAGTGATCATAGCAGTGAGGCAGGGATGGTGGCATTAAAAGATGTGAAAGTAGAATTAGGACAAAACAACAACAGGTTGGAGTGGAATGGTGGTGCTTTCCAAAGCCAGATCCAGCATGTGGGCTTGTACGATCCTTTGCTTTATTGGAATAATTCAGCAACAGCTTTGGGTGTTTGGAACGATCAAGCTGCTAATATTGGTTCATCAGTCACTTCTCTGATCTAG 1062 0.4407 MSANCEKMVAIPPTTNQWLQVDDHKVLMGSNGGSSNNNKVMEKPGQNQLVQQQQHPETLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNKRVKRPITSPCSAAIDTASNSSNSSSAPTAAASLQPQIDTASTSNHINPLFYGLPSSSSDVNLPLFSRFGSRISSSGFDLQLNNALGLGFSSGVLSNEASDNNGYRSGFGSNNMLLSSYTSTTTTTPAMSSLLLQQKFISGGLKNDADSSNTFQHGLSLTSLEQLQIASDHSSEAGMVALKDVKVELGQNNNRLEWNGGAFQSQIQHVGLYDPLLYWNNSATALGVWNDQAANIGSSVTSLI 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00720 353 Pfam Dof domain, zinc finger 58 113 IPR003851 GO:0003677|GO:0006355
Gma15g00720 353 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 3 337 IPR045174 GO:0003700|GO:0006355
Gma15g00720 353 MobiDBLite consensus disorder prediction 125 148 - -
Gma15g00720 353 ProSitePatterns Zinc finger Dof-type signature. 61 97 IPR003851 GO:0003677|GO:0006355
Gma15g00720 353 ProSiteProfiles Zinc finger Dof-type profile. 59 113 IPR003851 GO:0003677|GO:0006355
Gma15g00720 353 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 3 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00720 Gma-Chr15 5915502 5917027 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00720 59 353 C2C2-Dof Transcription Factor Family AT1G28310 39.103 2.00e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma15g00720 zf-Dof 6.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00720 - - gmx:100801049 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00720 15 5915502 5917027 Gma15g00720 15 5915502 5917027 ECH
Gma15g00720 15 5915502 5917027 Gma13g02107 13 36199939 36201212 GST
Gma07g01934 07 40577419 40578664 Gma15g00720 15 5915502 5917027 PCT
Gma15g00720 15 5915502 5917027 Gma07g01934 07 40577419 40578664 PCT