Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00674 ATGTTCACTTCTTCTCAGCTTCCTAGGCCTTTCCTTCTATCAAACCACTCCCAGTCATCAATTTCCTTAGACCTTCACAAGGTTTCTAATAGAGGACTTGATTGGAACCAAACCTTGTTGCAGGCTCAAAACTTGGAACTCCCAAATCCTCCTCCTATGAGGAAACAACAACAAACTCAGCCATCAGAGCCTTTGAAGTGTCCAAGATGTGATTCTATTAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAACCTCGACATTACTGCAGAGCTTGCAAGAGGCATTGGACTAAAGGTGGAACTCTACGCAATGTTCCTGTTGGTGGTGGAAGGAAGAATAAGCGAGTCAAGAAATCAACCACTCCAGCGATAGCCACCACTTCTATTAGTACCAGCACCTCAAATGCCAACATGGATGGTGAGTTGAATAACCCCATCACCATTCCTTCTCTAGCAGTGGATGATCACAAAACCACACCTTCCTCTCTCTATCAATATGTGTGCCTGCCCCAACAGAATCTGATGAGTACCAAAGACTCAGAAGAAGGCAAAGACTTTGGTATTGGTAATGGCATCTTCCTGAGTTCAACTGTGCCTTTTCCTCAAAGCCAAAGCCTTCTGTTCCCCTTCACAACATCAAACTCCTTTGACCCAAACCTATGTGCAATATCATCCTCTTTTCGATCCTCCAGTGTGTATAACTATGGTGAAGAGTTTAAAATAATGGAGGAGCCAACCCTCAACAGCATAATGCCCAACACTAGTGGAAGCACCAACACACAACCATGGGAGATAGCTGCAACAAGTTCTGGCATGGAAATGTCAAATTATTGGACTTGGGAGGACATTGATTCGTTTGTGTCAACTGATCCAAATGTTCCTTGGGATGATTCTGATATCAAACCCTGA 918 0.4336 MFTSSQLPRPFLLSNHSQSSISLDLHKVSNRGLDWNQTLLQAQNLELPNPPPMRKQQQTQPSEPLKCPRCDSINTKFCYYNNYNKSQPRHYCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSTTPAIATTSISTSTSNANMDGELNNPITIPSLAVDDHKTTPSSLYQYVCLPQQNLMSTKDSEEGKDFGIGNGIFLSSTVPFPQSQSLLFPFTTSNSFDPNLCAISSSFRSSSVYNYGEEFKIMEEPTLNSIMPNTSGSTNTQPWEIAATSSGMEMSNYWTWEDIDSFVSTDPNVPWDDSDIKP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00674 305 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677|GO:0006355
Gma15g00674 305 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677|GO:0006355
Gma15g00674 305 MobiDBLite consensus disorder prediction 46 65 - -
Gma15g00674 305 PANTHER OS06G0284500 PROTEIN 36 215 - -
Gma15g00674 305 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 215 IPR045174 GO:0003700|GO:0006355
Gma15g00674 305 Pfam Dof domain, zinc finger 64 117 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00674 Gma-Chr15 5542663 5544509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00674 50 194 C2C2-Dof Transcription Factor Family AT5G60200 41.975 5.20e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma15g00674 zf-Dof 4.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00674 - - gmx:100806358 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00674 15 5542663 5544509 Gma13g02153 13 36596023 36598110 GST
Gma07g01882 07 40091667 40092665 Gma15g00674 15 5542663 5544509 PCT
Gma15g00674 15 5542663 5544509 Gma07g01882 07 40091667 40092665 PCT