Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00376 ATGGTTTTCTCTTCTATTCCAGTCTATTCAGATCCTCCCAATTGGCAGCAGCAACAACAAAATCAACACCAAGCAAATGGAATTAACAGTCCTCAGCTGCTTTCGCCGCTACCTCAGCCGCCACAGGCTCCTCACGTGGGGGTTGAAGCCGGCCAAACCCGGTCCGGTCCGATGGCGGATCGGGCCAAGATTCCGGCCCAGGAAGGAGTTCTGAAGTGTCCTCGGTGTGAATCCACCAACACAAAGTTTTGCTACTTCAACAATTACAGCCTCTCTCAGCCACGGCACTTCTGCAAGACATGTAGGCGTTATTGGACAAGAGGTGGTGCTCTCAGGAACGTTCCTGTTGGTGGAGGATGCCGAAGGAACAAGAAGCACAAACGGAGTCGCTCAAAATCTCCGGTTTCTACTGACAAACCATCACTTCCTAATTCCACAAGTGCAATCCCTGAGCTTATTGGTCGTTTCCCACAACCCTTCATAGCCTCTCTTCAGAGTATGAACCGCTATGGTGTAGGGAATACAGGTGTTAACTTGCGTGAGATTCAAGCACAGAACGGTTCTCAAATGGGGTTTCAAATTGGAGGTCATGGCAATGGTACTTCAAGTGTTGCTACTGCAGGAGGAGGAGTGGAGCAGTGGCGGTTCCAGCAGTTTCCTTTCTTGAATGGTTTTGAGTCAACTTTAGCTGTTTCTAATTCCTACCCTTTTCAAAGTGAAAGTGTTGAAGGTTTGGTTGGAGATATTGCCGCAAGTTCTAGGGCTACTCAGCTCCCAGCACGGGTTAAAATGGAATATAACGGTGGCTTGAATTTGTCAAGATCTCCTTTGAGTGTCTCAGAAAATAGTAACCATTACTATTCATGGACGGATTTATCAGGGCTTGTATCTTCTTCAGCGAGTCATCTCTTGTAA 915 0.4754 MVFSSIPVYSDPPNWQQQQQNQHQANGINSPQLLSPLPQPPQAPHVGVEAGQTRSGPMADRAKIPAQEGVLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKHKRSRSKSPVSTDKPSLPNSTSAIPELIGRFPQPFIASLQSMNRYGVGNTGVNLREIQAQNGSQMGFQIGGHGNGTSSVATAGGGVEQWRFQQFPFLNGFESTLAVSNSYPFQSESVEGLVGDIAASSRATQLPARVKMEYNGGLNLSRSPLSVSENSNHYYSWTDLSGLVSSSASHLL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00376 304 MobiDBLite consensus disorder prediction 1 56 - -
Gma15g00376 304 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 300 - -
Gma15g00376 304 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Gma15g00376 304 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 300 IPR045174 GO:0003700|GO:0006355
Gma15g00376 304 Pfam Dof domain, zinc finger 70 125 IPR003851 GO:0003677|GO:0006355
Gma15g00376 304 MobiDBLite consensus disorder prediction 115 148 - -
Gma15g00376 304 MobiDBLite consensus disorder prediction 1 33 - -
Gma15g00376 304 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00376 Gma-Chr15 3173919 3175010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00376 19 289 C2C2-Dof Transcription Factor Family AT3G55370 39.869 4.06e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma15g00376 zf-Dof 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00376 - - gmx:100775899 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00376 15 3173919 3175010 Gma15g00376 15 3173919 3175010 ECH
Gma13g02990 13 44408979 44410619 Gma15g00376 15 3173919 3175010 GST
Gma15g00376 15 3173919 3175010 Gma12g00567 12 4755004 4756686 PCT
Gma15g00376 15 3173919 3175010 Gma11g01270 11 10834065 10835697 PCT
Gma12g00567 12 4755004 4756686 Gma15g00376 15 3173919 3175010 PCT
Gma11g01270 11 10834065 10835697 Gma15g00376 15 3173919 3175010 PCT