Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02110 ATGAAGATCCAGTGCGACGTGTGCAACAAACACGAGGCCTCCGTCTTCTGCACAGCCGACGAAGCCGCCCTCTGCGACGGCTGCGACCACCGTGTCCACCATGCCAACAAACTCGCCTCCAAACACCAACGCTTCTCTCTTCTCCGCCCTTCTCATAAACAACACCCTCTCTGCGATATTTGCCAGGAGAGAAGAGCCTTCACGTTCTGTCAGCAAGACAGAGCGATTCTCTGCAAAGAGTGTGACGTGTCAATTCACTCTGCCAACGAACACACCCTTAAGCACGATAGGTTCCTTCTCACTGGTGTTAAACTCGCAGCTTCTGCCATGCTTCGTTCATCACAAACTACCTCTGATTCAAACTCAACCCCTTCTCTTCTTAACGTTTCACATCAAACTACTCCACTTCCATCTTCCACCACCACCACCACCACCAACAACAACAACAACAAGGTTGCTGTTGAAGGAACTGGTTCAACGAGTGCTAGCAGCATATCAGAGTATTTGATAGAGACTCTTCCTGGGTGGCAAGTTGAGGACTTTCTCGATTCATATTTTGTTCCCTTTGGTTTCTGTAAGAATGATGAAGTGTTGCCACGGTTGGATGCTGACGTGGAGGGGCATATGGGTTCGTTTTCAACCGAGAACATGGGGATCTGGGTTCCTCAAGCGCCACCACCTCTTGTGTGTTCTTCACAAATGGATCGGGTGATAGTTCAAAGTGAGACCAACATCAAAGGTAGCAGCATATCGAGGTTGAAGGATGATACTTTCACTGTTCCACAGATTAGTCCTCCCTCCAATTCCAAGAGAGCCAGATTTCTATGGTAG 831 0.4874 MKIQCDVCNKHEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLLRPSHKQHPLCDICQERRAFTFCQQDRAILCKECDVSIHSANEHTLKHDRFLLTGVKLAASAMLRSSQTTSDSNSTPSLLNVSHQTTPLPSSTTTTTTNNNNNKVAVEGTGSTSASSISEYLIETLPGWQVEDFLDSYFVPFGFCKNDEVLPRLDADVEGHMGSFSTENMGIWVPQAPPPLVCSSQMDRVIVQSETNIKGSSISRLKDDTFTVPQISPPSNSKRARFLW 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02110 276 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Gma14g02110 276 MobiDBLite consensus disorder prediction 114 158 - -
Gma14g02110 276 Gene3D Classic Zinc Finger 1 95 - -
Gma14g02110 276 CDD Bbox1_BBX-like 57 100 - -
Gma14g02110 276 Pfam B-box zinc finger 54 93 IPR000315 GO:0008270
Gma14g02110 276 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 273 - -
Gma14g02110 276 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gma14g02110 276 SMART bboxneu5 53 100 IPR000315 GO:0008270
Gma14g02110 276 SMART bboxneu5 4 47 IPR000315 GO:0008270
Gma14g02110 276 CDD Bbox1_BBX-like 5 47 - -
Gma14g02110 276 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02110 Gma-Chr14 52235560 52237258 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma14g02110 zf-B_box 2e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02110 14 52235560 52237258 Gma11g01013 11 8607770 8609771 ECH
Gma14g02110 14 52235560 52237258 Gma12g00330 12 2741777 2745309 ECH
Gma14g02110 14 52235560 52237258 Gma14g02110 14 52235560 52237258 ECH
Gma17g02437 17 42361363 42363212 Gma14g02110 14 52235560 52237258 GST
Gma14g02110 14 52235560 52237258 Gma04g00085 04 751498 753238 PCT
Gma14g02110 14 52235560 52237258 Gma06g00080 06 721842 723021 PCT
Gma04g00085 04 751498 753238 Gma14g02110 14 52235560 52237258 PCT
Gma06g00080 06 721842 723021 Gma14g02110 14 52235560 52237258 PCT