Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02107 ATGGCTCGCTACTCCTTCCTCTTGGCCCTCCTCCTCCTCCTCTTCGCCGCCGTGTCCAGCGCCGCCGACGACATCCTGATCCGTCAGGTGGTGCCGGATGCCGTCGGCGAAGCGGCGGAGAAGGAGGAGGACCACCTGCTGAACGCGGAGCACCACTTCGCGAGCTTCAAGGCGAAGTTCGGGAAGAAGTACGCGACCAAGGAGGAGCACGACCGTCGCTTCGGCGTCTTCAAGTCCAACCTCCGCAGAGCGAGGCTGCACGCCAAGCTCGACCCCTCCGCCGTCCACGGCGTCACCAAATTCTCCGATCTCACTCCGGCCGAGTTCCGCCGCCAATTCCTGGGCTTCAAGCCGCTGCGCTTGCCGGCGAACGCTCAGAAGGCACCCATTCTCCCCACCAAGGATCTCCCAAAGGATTTCGATTGGCGAGACAAAGGAGCCGTCACTAACGTCAAGGACCAAGGGGCGTGTGGTTCGTGCTGGTCTTTCAGTACCACGGGAGCGTTGGAAGGAGCTCATTATCTGGCCACTGGTGAGCTTGTGAGCCTTAGTGAGCAACAGCTTGTGGATTGCGACCACGTGTGTGATCCAGAAGAATATGGAGCGTGTGACTCGGGCTGTAATGGTGGGTTGATGAACAATGCATTTGAGTACATACTTCAGTCTGGGGGAGTACAGAAAGAAAAGGACTATCCATACACGGGGAGAGATGGCACCTGCAAATTTGACAAAACCAAAGTTGCAGCTACTGTATCTAATTACAGTGTGGTTTCCCTTGATGAAGATCAAATTGCTGCAAACCTAGTGAAGAATGGCCCTCTTGCAGTTGGTATCAATGCAGTTTTTATGCAGACATATATAGGTGGCGTGTCGTGCCCGTACATCTGTGGGAAGCATTTGGATCATGGTGTTCTTATAGTGGGTTATGGTGAAGGTGCATATGCTCCCATTCGTTTTAAGAACAAGCCTTACTGGATCATTAAGAATTCATGGGGTGAGAGCTGGGGAGAGAATGGATATTACAAGATTTGCAGAGGTCGAAATGTGTGTGGAGTAGATTCCATGGTCTCAACTGTAGCTGCTATATATCCATCCAGCCATTAA 1104 0.5308 MARYSFLLALLLLLFAAVSSAADDILIRQVVPDAVGEAAEKEEDHLLNAEHHFASFKAKFGKKYATKEEHDRRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPAEFRRQFLGFKPLRLPANAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDGTCKFDKTKVAATVSNYSVVSLDEDQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLIVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAIYPSSH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02107 367 Gene3D Cysteine proteinases 28 360 - -
Gma14g02107 367 SMART pept_c1 136 360 IPR000668 GO:0006508|GO:0008234
Gma14g02107 367 SMART Inhibitor_I29_2 53 109 IPR013201 -
Gma14g02107 367 Pfam Cathepsin propeptide inhibitor domain (I29) 53 109 IPR013201 -
Gma14g02107 367 SUPERFAMILY Cysteine proteinases 50 359 IPR038765 -
Gma14g02107 367 Pfam Papain family cysteine protease 136 358 IPR000668 GO:0006508|GO:0008234
Gma14g02107 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 324 343 IPR025661 -
Gma14g02107 367 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 361 - -
Gma14g02107 367 CDD Peptidase_C1A 137 359 IPR039417 -
Gma14g02107 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 154 165 IPR000169 -
Gma14g02107 367 PANTHER CYSTEINE PROTEASE RD19C-RELATED 30 361 - -
Gma14g02107 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 300 310 IPR025660 -
Gma14g02107 367 PRINTS Papain cysteine protease (C1) family signature 154 169 IPR000668 GO:0006508|GO:0008234
Gma14g02107 367 PRINTS Papain cysteine protease (C1) family signature 302 312 IPR000668 GO:0006508|GO:0008234
Gma14g02107 367 PRINTS Papain cysteine protease (C1) family signature 324 330 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02107 Gma-Chr14 52178236 52181120 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02107 14 52178236 52181120 Gma14g02107 14 52178236 52181120 ECH
Gma17g02435 17 42312281 42315523 Gma14g02107 14 52178236 52181120 GST
Gma14g02107 14 52178236 52181120 Gma04g00261 04 2282295 2283780 PCT
Gma14g02107 14 52178236 52181120 Gma06g00245 06 2191828 2193876 PCT
Gma04g00261 04 2282295 2283780 Gma14g02107 14 52178236 52181120 PCT
Gma06g00245 06 2191828 2193876 Gma14g02107 14 52178236 52181120 PCT