Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00774 ATGGAACCTGCAGGAGCCTTCCCTGATGGAGAATGGGATTTCTTTCGCCGAATATTTGCCGGTGAGGATCATGAGCATGATTTATTCACACCCCAATTTCCACTTCTGCTTGATGGCGATGATGAATTGAACATTGTGACACAACCCACATTTTGTGCTGCTCCTGAAGTTGGTGAAAATGAGCGTATGTTTTATTCTTTAGATGCTCACCACTCAAATTCTTCTCAGTATATTTCACAAGAAAGTAGCCATAGTAATAGTAGCAATTGTAGTGGTGATGACACTATCTTCATTGCCAATCCGGGTAGCACAAACTATTATTTTAGTTACCCTGATCATGTGCTAGCAAATAATGCATGTGTATATTCCATGGATGAGAAATATTTTGCCTCTTTTGTCCCATCGCTTGCTGACATTGTAACGGAAGAGAGTGTCAAGTTGCATGAAGATGTAGCAAGTGATGACAGATTGGAGAATTCTGAATGCAATCAAATGGAACCTATCGTTTTTCCCAGCAAGCAGTTGCAGCTCAAAAGGAAGCTTGATGTGCCTGCTGAAGATAAAATGAACAAAGGATCTGAGAATCAAAAGAAAAGGGCTCGTGCTTTAAAAGATGGGCAAGGATGCATGAAAAACACATGGTCCAAGAAGAATCAGAAACATGCCAGCAACGGGGAAGAAGCAGAAGAGACTAATGCAGGTTCAGATGGGCAAAGCTCTAGTAGTAACATGTCAGAGGATGATAACATTTCTAAATCTGCTCTCAACTCAAATGGGAAAACAAGAGCAAGTAGGGGATCAGCAACAGATCCCCAGAGTCTGTATGCAAGGAAAAGAAGAGAGAGAATAAATGAGAGACTAAGAATCCTACAGAATCTTGTCCCAAATGGAACCAAGGTTGATATAAGCACAATGCTTGAAGAGGCAGTCAATTACGTGAAATTTTTGCAGCTCCAGATCAAGCTTTTAAGCTCCGATGATCTATGGATGTATGCTCCACTTGCTTACAATGGGCTTGATATTGGACTCAATCTCAACTCCCTATCACTTTAA 1053 0.4093 MEPAGAFPDGEWDFFRRIFAGEDHEHDLFTPQFPLLLDGDDELNIVTQPTFCAAPEVGENERMFYSLDAHHSNSSQYISQESSHSNSSNCSGDDTIFIANPGSTNYYFSYPDHVLANNACVYSMDEKYFASFVPSLADIVTEESVKLHEDVASDDRLENSECNQMEPIVFPSKQLQLKRKLDVPAEDKMNKGSENQKKRARALKDGQGCMKNTWSKKNQKHASNGEEAEETNAGSDGQSSSSNMSEDDNISKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGLNLNSLSL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00774 350 CDD bHLH_AtIND_like 268 330 - -
Gma14g00774 350 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 349 - -
Gma14g00774 350 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 349 - -
Gma14g00774 350 SMART finulus 273 322 IPR011598 GO:0046983
Gma14g00774 350 Gene3D - 269 325 IPR036638 GO:0046983
Gma14g00774 350 MobiDBLite consensus disorder prediction 184 279 - -
Gma14g00774 350 MobiDBLite consensus disorder prediction 184 205 - -
Gma14g00774 350 Pfam Helix-loop-helix DNA-binding domain 277 317 IPR011598 GO:0046983
Gma14g00774 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 331 IPR036638 GO:0046983
Gma14g00774 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 316 IPR011598 GO:0046983
Gma14g00774 350 MobiDBLite consensus disorder prediction 228 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00774 Gma-Chr14 7967313 7969222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00774 229 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 81.034 1.99e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma14g00774 HLH 1.2e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00774 14 7967313 7969222 Gma14g00774 14 7967313 7969222 ECH
Gma17g02263 17 40506805 40509090 Gma14g00774 14 7967313 7969222 GST