Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00748 ATGTTCACTGCACCTTTTCCCCACTCACTCTCTCACCTTTCTCCTAAAACATCTCCAGTGGGTTCTTCTTCTTCTATTACAACAACGTCGTCCAAGACCATGACCATGGCCATGGCCACGATCCTGCTCCTGTTCACGGTCTTCGCGGTTTCATCGGCCCTAGACATGTCGATAATCTCGTACGACAACGCCCACGCCGCCACGTCGCGCAGCGACGAGGAGCTGATGTCCATGTACGAGCAGTGGCTAGTAAAGCACGGCAAGGTGTACAACGCGCTCGGAGAGAAGGAGAAGAGGTTCCAGATCTTCAAGGACAACCTGCGATTCATCGACGACCACAACTCCCAAGAGGACCGAACCTACAAGCTCGGACTGAACCGGTTCGCGGATCTCACCAACGAGGAGTACAGGGCCAAGTACTTGGGAACCAAGATCGATCCCAACCGGAGGCTCGGCAAGACCCCGAGCAACCGATACGCGCCACGTGTCGGCGACAAACTACCTGAATCGGTTGATTGGAGGAAGGAAGGTGCTGTTCCTCCAGTCAAAGACCAAGGAGGCTGTGGGAGCTGTTGGGCATTCTCAGCAATCGGTGCAGTGGAAGGAATAAATAAGATAGTGACAGGTGAACTGATTTCGTTATCAGAACAAGAATTGGTGGATTGTGATACAGGATATAACGAAGGATGCAATGGAGGACTTATGGACTATGCATTTGAGTTCATTATCAACAATGGCGGCATTGATTCTGAAGAGGATTACCCTTACCGTGGTGTTGATGGTAGATGTGACACATATAGGAAAAATGCTAAGGTTGTTTCTATTGATGACTACGAAGATGTTCCTGCCTATGATGAGTTAGCTTTGAAAAAGGCTGTTGCAAATCAGCCCGTCAGTGTAGCTATTGAAGGAGGGGGCAGGGAATTTCAATTATATGTATCTGGTGTATTCACTGGGAGATGTGGCACAGCACTAGATCATGGTGTCGTGGCTGTTGGGTATGGTACAGCTAATGGTCATGATTATTGGATCGTAAGGAATTCATGGGGTCCTAGCTGGGGAGAAGATGGCTACATCAGGTTAGAAAGAAATCTTGCTAACAGCAGATCAGGCAAGTGTGGAATTGCAATTGAGCCATCTTATCCCCTTAAGAATGGTCCAAATCCACCTAATCCTGGACCATCACCCCCTTCACCTGTGAAGCCACCAAATGTCTGTGACAACTACTACAGCTGTGCTGATAGTGCTACTTGTTGCTGTATTTTCGAGTTCGGAAATGCTTGCTTTGAGTGGGGTTGCTGTCCTCTTGAGGGTGCTACCTGCTGTGATGACCACTACAGTTGCTGCCCTAACGACTATCCCATCTGCAACACTTATGCTGGAACTTGTCTCAAGAGCAAGAACAACCCATTCGGAGTGAAGGCATTGAGGCGTACTCCGGCTAAACCCCATTGGACCTTTGGGCGTAAGAACAAGGTCAGCAGTGCTTAA 1491 0.4896 MFTAPFPHSLSHLSPKTSPVGSSSSITTTSSKTMTMAMATILLLFTVFAVSSALDMSIISYDNAHAATSRSDEELMSMYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDDHNSQEDRTYKLGLNRFADLTNEEYRAKYLGTKIDPNRRLGKTPSNRYAPRVGDKLPESVDWRKEGAVPPVKDQGGCGSCWAFSAIGAVEGINKIVTGELISLSEQELVDCDTGYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYRGVDGRCDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQPVSVAIEGGGREFQLYVSGVFTGRCGTALDHGVVAVGYGTANGHDYWIVRNSWGPSWGEDGYIRLERNLANSRSGKCGIAIEPSYPLKNGPNPPNPGPSPPSPVKPPNVCDNYYSCADSATCCCIFEFGNACFEWGCCPLEGATCCDDHYSCCPNDYPICNTYAGTCLKSKNNPFGVKALRRTPAKPHWTFGRKNKVSSA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00748 496 SUPERFAMILY Granulin repeat 403 437 - -
Gma14g00748 496 PANTHER CYSTEINE PROTEASE 60 412 - -
Gma14g00748 496 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 325 335 IPR025660 -
Gma14g00748 496 Gene3D Cysteine proteinases 56 385 - -
Gma14g00748 496 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 60 412 - -
Gma14g00748 496 Gene3D Granulin 404 466 IPR037277 -
Gma14g00748 496 Pfam Granulin 417 464 IPR000118 -
Gma14g00748 496 PRINTS Papain cysteine protease (C1) family signature 185 200 IPR000668 GO:0006508|GO:0008234
Gma14g00748 496 PRINTS Papain cysteine protease (C1) family signature 327 337 IPR000668 GO:0006508|GO:0008234
Gma14g00748 496 PRINTS Papain cysteine protease (C1) family signature 342 348 IPR000668 GO:0006508|GO:0008234
Gma14g00748 496 SMART Inhibitor_I29_2 79 136 IPR013201 -
Gma14g00748 496 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 342 361 IPR025661 -
Gma14g00748 496 SUPERFAMILY Cysteine proteinases 71 383 IPR038765 -
Gma14g00748 496 SMART GRAN_2 406 463 IPR000118 -
Gma14g00748 496 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 185 196 IPR000169 -
Gma14g00748 496 MobiDBLite consensus disorder prediction 10 26 - -
Gma14g00748 496 MobiDBLite consensus disorder prediction 1 26 - -
Gma14g00748 496 CDD Peptidase_C1A 168 382 IPR039417 -
Gma14g00748 496 SMART pept_c1 167 383 IPR000668 GO:0006508|GO:0008234
Gma14g00748 496 Pfam Papain family cysteine protease 167 382 IPR000668 GO:0006508|GO:0008234
Gma14g00748 496 Pfam Cathepsin propeptide inhibitor domain (I29) 79 136 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00748 Gma-Chr14 7637573 7642006 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00748 14 7637573 7642006 Gma14g00748 14 7637573 7642006 ECH
Gma17g02292 17 40867750 40872159 Gma14g00748 14 7637573 7642006 GST
Gma14g00748 14 7637573 7642006 Gma04g00391 04 3374169 3377896 PCT
Gma04g00391 04 3374169 3377896 Gma14g00748 14 7637573 7642006 PCT