Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00739 ATGAAGAGGAAAACAGGTTCCTTGGATTTTCTGGCACCTCAACTCCCCTTATCTTTCTATCCATCGTcAGGCGATGCGATGAACAATTCCCTGTTTCTCCTTCACAATGCAAATGCAATCATCCACTTCAATTTTCATTCCCACCCTACCCTTCCTTCCATTCCCCGAACCACAAAACCCTTCCCTCACCGTCACTACCCACGCATCCAATGCTGCAGCAGCAACATCCAAATCGACATGGTGAAGAACAGCCAAGGAATCTATGCCCCCAAAAACGACAAGGTCGTCGTCCTCTGGGACCTCGACAACAAGCCCCCCCGCGGCGCTCCCTACGACGCCGCCGTCTCCCTCAAAACCCTCGCCGCCCGCTTCGGCCACCTCGTTGACTTCTCCGCCTACGCCAACCGCCACGCCTTCGTCCACCTCCCCCAGTGGGTCCTCCACCAGCGCCGCCACCGCAGAAACCTCGACATCCTCGAACGCAAGGGCGTCATCACCCCACCCGAGCCCTACACGTGCGGCGTGTGCGGCCGCAAGTGCAAGACCCACCTAGACCTCAAGAAACACTTCAAGCAGCTCCACCAGCGCGAGCGCCAGAAGAAGCTCAACCGTCTCAAATCCCTAAAGGGGAAAAAACGGCACCGTTTTAAGGAGCGGTTTTTGCGCGGGAATCACAAGTATGACGATGCTGCGAGAACGCTGGTGGTGCCGAAGGTCGGGTACGGGCTGGCGGCGGAGCTGCGGCGGGCGGGGGTGTTTGTGAAGACGGTGCAGGACAAGCCTCAGGCGGCGGATTGGGCCTTGAAGAGGCAAATGGTTCACTCCATGAGCAGAGGTATTGATTGGCTGTTTTTGGTTTCGGATGATTCGGATTTTTCGGAGATGCTGAGGAGGGCTAGGGAGGCTGATTTGGGAACCGTGGTGGTCGGGGATTGGGATAAGGCGCTTGGGCGCCACGCCGATTTGTGGGTGCCGTGGAGTGGAGTGGAGAATGGGGAGGTGGGGGATTTGTTGCCCAAGAGAAGAAGGGAGAATAGTAGAAGAAGAGAACAGGGGGAAGAACATGGTTTTGGTTTGGAAGATGATGACGGTGGGGTGTTTTTGAATGAGGATGAGGAATTGGGGCAAGAGTTTATGTTGTTGTATAGTGAGGACGAGGATGAGGACGTGGATGTGGAGGACTATTATGATGACGATGATGATGATGAAGAAGAGGAAGATGGGTTTTATATTCTTTGA 1239 0.5488 MKRKTGSLDFLAPQLPLSFYPSSGDAMNNSLFLLHNANAIIHFNFHSHPTLPSIPRTTKPFPHRHYPRIQCCSSNIQIDMVKNSQGIYAPKNDKVVVLWDLDNKPPRGAPYDAAVSLKTLAARFGHLVDFSAYANRHAFVHLPQWVLHQRRHRRNLDILERKGVITPPEPYTCGVCGRKCKTHLDLKKHFKQLHQRERQKKLNRLKSLKGKKRHRFKERFLRGNHKYDDAARTLVVPKVGYGLAAELRRAGVFVKTVQDKPQAADWALKRQMVHSMSRGIDWLFLVSDDSDFSEMLRRAREADLGTVVVGDWDKALGRHADLWVPWSGVENGEVGDLLPKRRRENSRRREQGEEHGFGLEDDDGGVFLNEDEELGQEFMLLYSEDEDEDVDVEDYYDDDDDDEEEEDGFYIL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00739 412 CDD PIN_LabA-like 181 311 - -
Gma14g00739 412 MobiDBLite consensus disorder prediction 342 361 - -
Gma14g00739 412 Gene3D - 88 327 - -
Gma14g00739 412 PANTHER - 69 385 - -
Gma14g00739 412 PANTHER OS06G0166200 PROTEIN 69 385 - -
Gma14g00739 412 Coils Coil 191 211 - -
Gma14g00739 412 ProSiteProfiles Zinc finger C2H2 type domain profile. 171 199 IPR013087 -
Gma14g00739 412 MobiDBLite consensus disorder prediction 382 412 - -
Gma14g00739 412 MobiDBLite consensus disorder prediction 342 368 - -
Gma14g00739 412 ProSitePatterns Zinc finger C2H2 type domain signature. 173 194 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00739 Gma-Chr14 7494181 7495946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00739 17 393 C2H2 Transcription Factor Family AT5G52010 59.686 3.67e-159 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma14g00739 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00739 14 7494181 7495946 Gma14g00739 14 7494181 7495946 ECH
Gma17g02300 17 40965149 40966944 Gma14g00739 14 7494181 7495946 GST