Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00730 ATGGCTCTTCTACTAGACAACTGTGAAAGCATTTTGCTGTCTTTGGACACACACAAATCAGTTCCTGCACCTTTCCTTACCAAAACATACCAACTTGTAGACGACCCTTCCACCGACCACATAGTCTCTTGGGGCGAAGACGACACCACCTTCGTCGTTTGGAGACCCCCCGAGTTCGCTAGGGACCTTCTCCCCAACTATTTCAAACACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACCTATGGTTTTAGAAAGATTGTGCCTGATAGATGGGAGTTCGCGAATGAGTTCTTCAAGAAAGGAGAGAAGAACTTGTTGTGCGAGATTCACAGAAGAAAAACCCATCACCAGCATCATCAACAAGTACAAGCCATGAACAACCATCACCACCATCATAAGTTTGGACTCAACGTTTCCTCTATCTTTCCCTTCCACAATAACAGACTCAGTGTTTCCCCTTCTCATGATTCGGACGAGGTAATAATACCCAATTGGTGTGACTCGCCCCCAAGAGGAGTTGCCGGTGTAAACAACAACAACAGCAGCAGCAACAACTACAACACTGTCACTGCACTTTCTGAGGACAACGAAAGACTTAGGAGAAGCAACAACATGCTCATGTCGGAGCTCGCACACATGAAGAAGCTTTACAACGACATCATCTACTTCGTTCAGAACCATGTCAAGCCCGTGGCTCCTAGCAACAACAACAATTTCCCTTCTTTTCTACTCTGCAGTGATAATAGTAATATCAACAACAACACATCACCACAAACACAAACACAAGCACAAGCCTCTCCTATGAGTAACGTTTCAACGGTGCAAAGGCAACTGAAGCAGTTTGTAGGGTGCTATTCCAACAACACAAAGCAAGCGCGTGCTGTGAACTCTCCCACTAACAGTTCCATAACCATTGTTGAGGAAGAGGCTAGCAGTAACAGTTGCAAGACCAAGCTTTTTGGGGTGTCTCTTCAATCCAAGAAAAGGGTGCACCCTGAGTACGGGTCTAACAATGTTCTTCAAAGCTCCGAAACGAATAAGGCGCGTTTGGCTTTGGAAAATGATGAACTATTAGGCTTGAATCTTATGCCCCCTTCAACTTGTTAA 1113 0.4528 MALLLDNCESILLSLDTHKSVPAPFLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKNLLCEIHRRKTHHQHHQQVQAMNNHHHHHKFGLNVSSIFPFHNNRLSVSPSHDSDEVIIPNWCDSPPRGVAGVNNNNSSSNNYNTVTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNNNNFPSFLLCSDNSNINNNTSPQTQTQAQASPMSNVSTVQRQLKQFVGCYSNNTKQARAVNSPTNSSITIVEEEASSNSCKTKLFGVSLQSKKRVHPEYGSNNVLQSSETNKARLALENDELLGLNLMPPSTC 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00730 370 Gene3D - 17 117 IPR036388 -
Gma14g00730 370 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00730 370 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00730 370 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00730 370 PANTHER BNAC06G00310D PROTEIN 276 369 - -
Gma14g00730 370 PANTHER BNAC06G00310D PROTEIN 12 238 - -
Gma14g00730 370 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00730 370 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00730 370 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00730 370 Coils Coil 191 211 - -
Gma14g00730 370 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Gma14g00730 370 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 276 369 IPR027725 -
Gma14g00730 370 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 238 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00730 Gma-Chr14 7328232 7329864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00730 1 369 HSF AT1G46264 53.333 3.44e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gma14g00730 HSF_DNA-bind 5e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00730 14 7328232 7329864 Gma14g00730 14 7328232 7329864 ECH
Gma17g02310 17 41107010 41108692 Gma14g00730 14 7328232 7329864 GST
Gma14g00730 14 7328232 7329864 Gma04g00374 04 3197921 3199429 PCT
Gma14g00730 14 7328232 7329864 Gma06g00368 06 3140104 3141277 PCT
Gma04g00374 04 3197921 3199429 Gma14g00730 14 7328232 7329864 PCT
Gma06g00368 06 3140104 3141277 Gma14g00730 14 7328232 7329864 PCT