Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00695 ATGCAGCAATCAAACGGCTCTGATTCGTCCACGACGGAGCAGAAAGCGCCGCCGCCGAGGCAATCACCGGCGGTGGCGAGGCCGCAGCAATGGCTGCCGATGCAGTACCCTGCGGCGGCGATGGTAATGCCGCACCACATGTTGCCGCCTCAGCATTACGCGCCGCCGCCCTACGTGCCCTTCCACCACCACCACCACCATCACCAGTACGCGGCGCCGCACGTGCCGAACCAACATCAGCAGCAGCAGCAGCATCACCACCATCAGAACGGATCCGGCGGCGAGAACAAAACCATCTGGATCGGCGATTTGCATCACTGGATGGACGAAAACTATCTCCATCGCTGTTTCGCTTCCACCGGCGAGATTTCCTCCATCAAGGTTATTCGCAATAAGCAAACTGGCTTATCAGAGGGTTATGGATTTGTGGAGTTCTATTCACATGCTACAGCTGAGAAAGTTTTGCAAAATTATGCTGGAATTTTGATGCCCAATACTGAGCAACCATTCCGTCTGAACTGGGCAACATTTAGCACAGGAGACAAGGGTTCAGATAATGTTCCTGACCTTTCTATTTTTGTAGGAGATTTAGCTGCAGATGTTACAGATAGTTTGTTGCATGAAACTTTTGCTAGTGTATATCCTTCTGTTAAAGCTGCAAAAGTTGTTTTTGATGCCAATACTGGCCGTTCAAAGGGCTATGGTTTCGTCAGGTTTGGAGATGACAATCAGAGAACCCAGGCCATGACTCAGATGAATGGTGTTTACTGTTCTAGCAGGCCTATGCGTATTGGAGCTGCAACTCCAAGGAAATCATCTGGCCATCAACAAGGTGGGCAGTCAAATGGCACAGCCAACCAATCTGAAGCAGATTCTACAAACACAACTATATTTGTTGGAGGACTCGACCCTAATGTTTCAGATGAAGATCTCAGGCAGCCATTCTCCCAGTATGGTGAGATAGTCTCTGTTAAGATACCTGTTGGAAAGGGCTGTGGTTTTGTCCAATTCGCAAACAGAAATAATGCTGAAGAGGCCTTGCAGAAGCTAAACGGGACATCGATTGGCAAGCAAACAGTTCGTCTTTCTTGGGGCCGTAATCCAGCAAATAAGCAGTTTAGAATGGATTTCGGCAACCCCTGGACTGGGGCATATTATGGGGCCCCTATGTATGATGGCTATGGGTACGCATTGACCCCTCGTCATGATCCCAGCATATATGCTGCTGCTTATGGGGCTTACCCCCTTTATGGAGGCCACCAACAACAAACAAGAATCCCTCCTAATTGTGGAGCGGAGATGAATTTTGATAGCCTGAGGTAG 1323 0.4928 MQQSNGSDSSTTEQKAPPPRQSPAVARPQQWLPMQYPAAAMVMPHHMLPPQHYAPPPYVPFHHHHHHHQYAAPHVPNQHQQQQQHHHHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPMYDGYGYALTPRHDPSIYAAAYGAYPLYGGHQQQTRIPPNCGAEMNFDSLR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00695 440 SUPERFAMILY RNA-binding domain, RBD 65 178 IPR035979 GO:0003676
Gma14g00695 440 MobiDBLite consensus disorder prediction 270 299 - -
Gma14g00695 440 Gene3D - 60 186 IPR012677 -
Gma14g00695 440 SMART rrm1_1 191 265 IPR000504 GO:0003723
Gma14g00695 440 SMART rrm1_1 296 363 IPR000504 GO:0003723
Gma14g00695 440 SMART rrm1_1 98 173 IPR000504 GO:0003723
Gma14g00695 440 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 190 269 IPR000504 GO:0003723
Gma14g00695 440 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 297 360 IPR000504 GO:0003723
Gma14g00695 440 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 192 261 IPR000504 GO:0003723
Gma14g00695 440 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 166 IPR000504 GO:0003723
Gma14g00695 440 MobiDBLite consensus disorder prediction 74 96 - -
Gma14g00695 440 SUPERFAMILY RNA-binding domain, RBD 283 395 IPR035979 GO:0003676
Gma14g00695 440 Gene3D - 189 265 IPR012677 -
Gma14g00695 440 CDD RRM3_NGR1_NAM8_like 294 365 - -
Gma14g00695 440 MobiDBLite consensus disorder prediction 1 18 - -
Gma14g00695 440 MobiDBLite consensus disorder prediction 57 97 - -
Gma14g00695 440 CDD RRM2_SECp43_like 189 268 - -
Gma14g00695 440 CDD RRM1_SECp43_like 98 178 - -
Gma14g00695 440 SUPERFAMILY RNA-binding domain, RBD 173 283 IPR035979 GO:0003676
Gma14g00695 440 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 177 IPR000504 GO:0003723
Gma14g00695 440 MobiDBLite consensus disorder prediction 265 299 - -
Gma14g00695 440 Gene3D - 272 373 IPR012677 -
Gma14g00695 440 PANTHER POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED 24 423 - -
Gma14g00695 440 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 295 367 IPR000504 GO:0003723
Gma14g00695 440 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 24 423 - -
Gma14g00695 440 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00695 Gma-Chr14 6977901 6981585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00695 99 375 Eukaryotic Initiation Factors Gene Family AT4G34110 29.930 4.37e-30 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00695 14 6977901 6981585 Gma14g00695 14 6977901 6981585 ECH
Gma17g02344 17 41443049 41447808 Gma14g00695 14 6977901 6981585 GST
Gma14g00695 14 6977901 6981585 Gma04g00348 04 2991053 2997140 PCT
Gma14g00695 14 6977901 6981585 Gma06g00336 06 2930572 2938615 PCT
Gma04g00348 04 2991053 2997140 Gma14g00695 14 6977901 6981585 PCT
Gma06g00336 06 2930572 2938615 Gma14g00695 14 6977901 6981585 PCT