Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00642 ATGGGAATGGGAGGAATTGCAGTGAGCGTGGTTACAGTGTTGTTGTTGATGATTGGATTAACAATGGGAATGAGTTTGAGTTCGAGAACAGAATGGTTTGCGTTAAGGGAGCTTCGACAATCGTTGGAGATTAGGGCAAAGTATTGGCCAATAAAAGCCGAACCGTGCGGGAACTGGACCGGGGTTCAGTGTCGGAACGGTCGAGTTGTGGGTATAAACGTGTCAGGTTTGAGGAGAACAAGGTGGGGTAGGCTTAACCCAAGTTTTGAAGTGGATTCTCTAGTGAATTTCACACTCTTAGAAACGTTTAATGCTTCTGGGTTTAAGCTTAATGGGTCTATTCCTGAGTGGTTGGGTGAGAGACTTGGTGTGTTGGAGGAGCTTGACCTTAGCCTTTGTTCTATAAAGGGTTCAATTCCTGATTCAATTGGGAGGTTGAGTAAGTTGAAAGTTTTGTTGCTTTCAGGGAATTTTCTCACTGGTAGAATGCCTTCGACCCTTGGGAACCTCACAAGGCTTTCTGTTCTTGATCTCTCTGGCAACTCTCTTTCATGGCCTGTGCCTGATTCTGTGTCTAAACTTGGGAACCTCTCAAGGCTTGATCTTTCTTATAATTTCTTGTCTGGGTCTGTTCCACCTGAACTGGGTGCCCTTTCGAGTCTTCAATTTTTGAACCTTTCTGGGAATTCTTTTACTGGGTCGGTTCCCTCTCAACTGGGTAACCTTTCCAAGTTGGTTGAGGTTGATCTTAGTATGAATTTTCTGTCGAGGTCATTGTCGGGTGGTTTGTTTTCTTCTGTGGTTTTGGCCCTCGAGGTTCTCATTCTCAGAGGGAATTTGTTAGATGGTGTTCTTCCTGCTAATTTGAGGTCAATGCCTAGGTTGCACTTTCTTGATGTGTCCAGTAACAACCTCACTGGGACACTGCCGAATTTTGCCGATTGGAATGTTAGCTCTGCTGGTGTTGTGTTCAATCTGTCAAACAATATGTTCTATGGACTTCTGAATACTTCACTTGACAGGTTTAAAATGATTGATTTATCAAGTAATTTTTTGGAAGGTGAGGTGCTAGGTGGTGGTGGTGGTGTTAGTAATGTTGATCTAGATAGAAATTGCCTACAGAGGATTCCAAACCAGAGGAATTTGGAAGATTGTAGAATGTTTTATGATAAAAGAAATTTATCCTCTGCATTCCCAGAATCTGAGTCCAGAAGCCGCAGACGGGTGATATTCATGCTGGTAGGAATATTTGGTGGGCTTGGCTTTATTGTGCTGCTGGCATTGGTCCTCATGCTTGTTCTAAAACAATGTCACAATCGGAAAAGCTTGGAAGTTCCAAGGGAGACCAAAGATGGGGGGGCTGTTGAAGAAGGGGAAAGTCCTATACCTCCGAAAGATATTGACTTTGTGACTGGTGTGGGAGAAGCATATAGTTTTGAGCAAATGCTCCGTTTGACTGGCAATTTCGCTGAATCAAATGTCATAAAGCATGGTCATTCTGGGGACCTCTTCTTGGGAGTCTTGGAAGGTGGAGCAACTGTGGTTGTCAAAAAGGTAGATTTGAATTTATTTAAGAGAGAATCGTATGTTGTGGAATTGGGACTATTAAGTAAGGTTCCACATGCAAGATTGGTTCCAATCCTGGGCCACTGCTTGGACAATGAAAATGAGAAATGCATAGTTTACAAGTACATGCCAAATCGAGATTTAGCTACTTCCTTGCACAGAGTCACTGGTTCAGATGGTAAAATACAGTCCCTGGATTGGATCACGAGATTGAAAATTGCGATAGGAGCTGCTGAAGGCATAGCTTACCTACATGAGTGCAGCCCTCCCCTTGTCCACAGAGATATCCAAGCTAGCAGTATACTACTTGATGATAAATTTGAAGTGCGACTAGGAAGTTTGAGTGAGGTTACTGCCCAAGGAGATCTTCAACAAGGAGTCATCTCAAGGGTTTTCAGCAAGCCACCATCTTCTAATCAAGCCGATTCTGGTAAATCACCAGTGACATGCACCTATGATGTCTACTGTTTTGGGAAGATTTTACTTGAGCTCATTACCGGTAACATTGAAGTCAGCAAGTCAGATGATGCCACTACAAAGGAGTGGTTAGAGCAAACCTTGCCTTACATCACTATATACGATAAAGAACGGGTGACTAAGATTATTGACCCATCATTGATCGTGGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAATGCATGCTTGAAACCCAAGCCTTCCAAACGTCCTCCTATGAGACATGTCCTGAAAGCATTGGAAAATCCATTGAAGATTGTGAGAGAAGAAAATACTAGCTCAGCAAGGTTGAGAACAAACTCTTCTAGGAAATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGGCACAGCTCATCAGACAGTGTTGTTGCCACAAACAAAGAGGGTTCAAATGACACTAAAAAATCAGGAAAAGTAGGTTCTCAAAGTAGTGGAAATGATCACTCTTCTTCCAATAAAAGATCGTCCAATGAAATTTTCCCTGAACCATTGGAAATACAAGATGTGGAGACAGGAGTGACAAGATAA 2586 0.4296 MGMGGIAVSVVTVLLLMIGLTMGMSLSSRTEWFALRELRQSLEIRAKYWPIKAEPCGNWTGVQCRNGRVVGINVSGLRRTRWGRLNPSFEVDSLVNFTLLETFNASGFKLNGSIPEWLGERLGVLEELDLSLCSIKGSIPDSIGRLSKLKVLLLSGNFLTGRMPSTLGNLTRLSVLDLSGNSLSWPVPDSVSKLGNLSRLDLSYNFLSGSVPPELGALSSLQFLNLSGNSFTGSVPSQLGNLSKLVEVDLSMNFLSRSLSGGLFSSVVLALEVLILRGNLLDGVLPANLRSMPRLHFLDVSSNNLTGTLPNFADWNVSSAGVVFNLSNNMFYGLLNTSLDRFKMIDLSSNFLEGEVLGGGGGVSNVDLDRNCLQRIPNQRNLEDCRMFYDKRNLSSAFPESESRSRRRVIFMLVGIFGGLGFIVLLALVLMLVLKQCHNRKSLEVPRETKDGGAVEEGESPIPPKDIDFVTGVGEAYSFEQMLRLTGNFAESNVIKHGHSGDLFLGVLEGGATVVVKKVDLNLFKRESYVVELGLLSKVPHARLVPILGHCLDNENEKCIVYKYMPNRDLATSLHRVTGSDGKIQSLDWITRLKIAIGAAEGIAYLHECSPPLVHRDIQASSILLDDKFEVRLGSLSEVTAQGDLQQGVISRVFSKPPSSNQADSGKSPVTCTYDVYCFGKILLELITGNIEVSKSDDATTKEWLEQTLPYITIYDKERVTKIIDPSLIVDEDLLEEVWAMAIVANACLKPKPSKRPPMRHVLKALENPLKIVREENTSSARLRTNSSRKSWSTAFFGSWRHSSSDSVVATNKEGSNDTKKSGKVGSQSSGNDHSSSNKRSSNEIFPEPLEIQDVETGVTR 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00642 861 SUPERFAMILY L domain-like 55 312 - -
Gma14g00642 861 Pfam Leucine rich repeat 125 183 IPR001611 GO:0005515
Gma14g00642 861 PANTHER OS01G0253100 PROTEIN 7 847 IPR045271 GO:0004714|GO:0006468
Gma14g00642 861 SMART LRR_typ_2 170 193 IPR003591 -
Gma14g00642 861 SMART LRR_typ_2 242 266 IPR003591 -
Gma14g00642 861 SMART LRR_typ_2 146 169 IPR003591 -
Gma14g00642 861 SMART LRR_typ_2 292 316 IPR003591 -
Gma14g00642 861 SMART LRR_typ_2 194 217 IPR003591 -
Gma14g00642 861 SMART LRR_typ_2 218 241 IPR003591 -
Gma14g00642 861 MobiDBLite consensus disorder prediction 445 464 - -
Gma14g00642 861 ProSiteProfiles cAMP/cGMP binding motif profile. 494 542 IPR000595 -
Gma14g00642 861 MobiDBLite consensus disorder prediction 807 844 - -
Gma14g00642 861 SUPERFAMILY L domain-like 271 394 - -
Gma14g00642 861 Gene3D Transferase(Phosphotransferase) domain 1 565 790 - -
Gma14g00642 861 ProSiteProfiles Protein kinase domain profile. 489 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00642 861 PANTHER OS03G0724300 PROTEIN 7 847 - -
Gma14g00642 861 Gene3D Ribonuclease Inhibitor 188 403 IPR032675 -
Gma14g00642 861 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Gma14g00642 861 Gene3D Phosphorylase Kinase; domain 1 464 564 - -
Gma14g00642 861 Pfam Protein tyrosine and serine/threonine kinase 493 765 IPR001245 GO:0004672|GO:0006468
Gma14g00642 861 SUPERFAMILY Protein kinase-like (PK-like) 470 766 IPR011009 -
Gma14g00642 861 MobiDBLite consensus disorder prediction 807 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00642 Gma-Chr14 6255447 6260763 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Gma14g00642 PK_Tyr_Ser-Thr 5.6e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00642 14 6255447 6260763 Gma14g00642 14 6255447 6260763 ECH
Gma17g02396 17 41983581 41987328 Gma14g00642 14 6255447 6260763 GST