Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00624 ATGGATGCAATTATTGCAACCCTGAATGCCAGAGCTAATCTAGTCACTAAGGGAATTGGATCTAGAAACAGAAGTTCTTCTGGGTTCTGGGGTGAGAACACAAGGGGAAGCCTTAACATCAGGTTTTGTAGTACTCCACGCAAGAGTTTAAAAGCTACAACTTTCAAGCCTGGCTTTGCACAAGCTGTTTACACACCAGACGTGAACAAAGAGCCACAGATATTCCAGGGACCCATTTTTCAGAGTCCAAAAGCAAACCCGGAAAATGTAGTTGCTATCATATTGGGTGGTGGTGCTGGAACTCGACTCTTTCCTCTTACTAGCACAAGAGCTAAGCAAGCGGTTCCAATTGCAGGGTGTTATAGACTCATAGATATTCCTATGAGCAATTGCATCAACAGTGGCATCAGAAAAGTGTACGTTTTAACACAGTTCAACTCTTTCTCCCTCAATGGCCACTTATCTCGCACTTACAATTTTGGAAATGGGGTGAACTTTGGAGGTGGTTTTGTGGAGGTCTTGGCTGCTACTCTAACTAATGGAGAGGCTGGGAATAAATGGTTCCAAGGGACAGCTGATGCAGTGCGACGATTTAGTTGGGTTTTTGAGGATGCCAAGAACAAGAATATTGAGCACATCTTGATCATTTCTGGTGATCATCTTTGCCGGATGGACTATATGAAGCTTGTGGAGAAACATATTGGGACAAATGCTGATATCACAGTTTCATGTGTGCCTATGGATGAAAGCCGTGCATCAGACTACGAGCTGATGAAAATTGATAGAAAGGGAGAGATTACCCAGTTTGTAGAAAAACCAGAAGGATCAGATTTGAAGGCAATGCATGTTGATACCACTCTCCTAGGCTTAACAGCAGAAGAAGCACAGACATATCCTTACATTGCACCCATGGGTGTTTCTGTATTCAGAACTGAGACCCTACTGAAACTGTTAAGATGGAGCTGTCCTTCTTGCAATGACTTTGGATCTGAAATTATCCCATCTGCTTTGAGGGACCACAAAGTCCAAGCATATATGTTCAGGGACTACTGGAAAGATATTGGAACTATAAAGTCCTTCTTTGAAGCCAATCTGGAACTAACAAAACAGTCTCCAAATTTTGAATTCTATGATCAAGAGTCGCCTTTCTTCACTTCCCCAAGATTCCTACCACCCACTAAAGCAATAAAGTGCAAGATTGTGGATGCAATTATTTCTCATGGTTGCTTCTTGAGTGAGTGTAGAGTTCAACATTCTATTGTTGGTGTGCGATCACGTTTAGAATCTGGTTCAGAGCTTCAGGATACCATGATGATGGGTGCTGACTACTATCAAACTGATTCTGAAATTGCAACTCTGCTGAAGGAAGGAAAGGTTCCAATAGGTGTTGGAGAGAATACTAAAATCAGGAATTGTATTATCGACAAGAATGCCAGGATAGGAAGAAATGTGATTATAGCCAATACTGATGGTGTTCAAGAAGCAGACAGGCCTATGGAAGGATTCTATATTAGGTCAGGCATCGTAGTTGTAGCGAATAATGCAACAATTGAAGATGGAACAGTCATTTGA 1572 0.4186 MDAIIATLNARANLVTKGIGSRNRSSSGFWGENTRGSLNIRFCSTPRKSLKATTFKPGFAQAVYTPDVNKEPQIFQGPIFQSPKANPENVVAIILGGGAGTRLFPLTSTRAKQAVPIAGCYRLIDIPMSNCINSGIRKVYVLTQFNSFSLNGHLSRTYNFGNGVNFGGGFVEVLAATLTNGEAGNKWFQGTADAVRRFSWVFEDAKNKNIEHILIISGDHLCRMDYMKLVEKHIGTNADITVSCVPMDESRASDYELMKIDRKGEITQFVEKPEGSDLKAMHVDTTLLGLTAEEAQTYPYIAPMGVSVFRTETLLKLLRWSCPSCNDFGSEIIPSALRDHKVQAYMFRDYWKDIGTIKSFFEANLELTKQSPNFEFYDQESPFFTSPRFLPPTKAIKCKIVDAIISHGCFLSECRVQHSIVGVRSRLESGSELQDTMMMGADYYQTDSEIATLLKEGKVPIGVGENTKIRNCIIDKNARIGRNVIIANTDGVQEADRPMEGFYIRSGIVVVANNATIEDGTVI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00624 523 SUPERFAMILY Nucleotide-diphospho-sugar transferases 89 484 IPR029044 -
Gma14g00624 523 SUPERFAMILY Trimeric LpxA-like enzymes 386 523 IPR011004 -
Gma14g00624 523 Pfam Nucleotidyl transferase 92 369 IPR005835 GO:0009058|GO:0016779
Gma14g00624 523 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 187 195 IPR005836 GO:0005978|GO:0008878
Gma14g00624 523 CDD ADP_Glucose_PP 92 354 - -
Gma14g00624 523 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 523 - -
Gma14g00624 523 Gene3D Hexapeptide repeat proteins 389 523 - -
Gma14g00624 523 CDD LbH_G1P_AT_C 391 517 - -
Gma14g00624 523 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 388 IPR029044 -
Gma14g00624 523 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 523 IPR011831 GO:0005978|GO:0008878
Gma14g00624 523 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 90 487 IPR011831 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00624 Gma-Chr14 6091892 6096299 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00624 14 6091892 6096299 Gma14g00624 14 6091892 6096299 ECH
Gma17g02411 17 42103884 42108036 Gma14g00624 14 6091892 6096299 GST
Gma14g00624 14 6091892 6096299 Gma04g00286 04 2496611 2500994 PCT
Gma14g00624 14 6091892 6096299 Gma06g00272 06 2425373 2429462 PCT
Gma04g00286 04 2496611 2500994 Gma14g00624 14 6091892 6096299 PCT
Gma06g00272 06 2425373 2429462 Gma14g00624 14 6091892 6096299 PCT