Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02891 atgccatcgacatctctTACCCCGACGTGGAGCACCACATTCTCCCCTCGAAGCTCTTCCTCAAAGTCCCCATCTCCTGCTTCTACGTCGACAATATTCGCAAATCCGTCGCTACTCAATATAAGACCCGCCCCTCCGACACTCTCCGACATTGCCGACGCCGTCTACGCTGGCCTCGTCTCCTCCAACCAGCTCCACGAGGCTAACTCCATTTCCGACCCTTCAATTCTTGATGTGGGCCAAAACCTCGCCGTTCCTCTCCCTTGCACCTGTTTCAACGGCTCTGATAACTCTCTCCCCGCGATTTACCTCTCTTATGTTGTTCGCCTCGTTAATACTCTCGCTGTTCCAATACCCGATAATTAA 366 0.5055 MPSTSLTPTWSTTFSPRSSSSKSPSPASTSTIFANPSLLNIRPAPPTLSDIADAVYAGLVSSNQLHEANSISDPSILDVGQNLAVPLPCTCFNGSDNSLPAIYLSYVVRLVNTLAVPIPDN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02891 121 Gene3D LysM domain 47 96 IPR036779 -
Gma13g02891 121 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 28 115 - -
Gma13g02891 121 Pfam LysM domain 47 86 IPR018392 -
Gma13g02891 121 MobiDBLite consensus disorder prediction 1 28 - -
Gma13g02891 121 CDD LysM 47 85 IPR018392 -
Gma13g02891 121 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN LYP6 28 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02891 Gma-Chr13 43490534 43490899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02891 48 114 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 67.164 5.61e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02891 - - gsj:114378675 151.754