Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02460 ATGGCCACCGTGCAACTCCAATCCCTAACCCTTGTTCGCTCCTCAGCACTTCCTTCCGCCACCTTCTCCCCTCCGATCGCCGTCTCCGGCCGCCGCAACTCCGCCGCGCTGCCGCGCTACTCCGGCCTCCGGCTCCGACCCGCCGCTGAGACCAGTTTCCCGACTCACGCCAGCTCGAGAACCGCTTCTCGCGGCGGAGGTGTCAAGTGCGAGGCAGGAGACACCGCTGTTGAAGTTGCTCCCGTTACTGATGCAAATTGGCAATCACTTGTGATTGAATCCGAGTCTCCTGTACTGGTTGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGTATGATCCACCCGATAATTGACGAGCTGGCAAAAGAATATACTGGTAAGCTAAAGTGCTACAAACTCAATACTGATGAGAGCCCTTCAACTGCTACTAAGTACGGGATACGAAGTATCCCAACTGTCATTATTTTCAAGAATGGTGAGAAGAAAGATACAGTTATAGGAGCTGTGCCCAAGACAACATTGACCTCAAGCATTGAAAAATTCTTGTGA 549 0.5319 MATVQLQSLTLVRSSALPSATFSPPIAVSGRRNSAALPRYSGLRLRPAAETSFPTHASSRTASRGGGVKCEAGDTAVEVAPVTDANWQSLVIESESPVLVEFWAPWCGPCRMIHPIIDELAKEYTGKLKCYKLNTDESPSTATKYGIRSIPTVIIFKNGEKKDTVIGAVPKTTLTSSIEKFL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02460 182 CDD TRX_family 85 179 - -
Gma13g02460 182 ProSitePatterns Thioredoxin family active site. 99 117 IPR017937 -
Gma13g02460 182 ProSiteProfiles Thioredoxin domain profile. 70 182 IPR013766 -
Gma13g02460 182 TIGRFAM thioredoxin: thioredoxin 83 181 IPR005746 GO:0015035
Gma13g02460 182 PRINTS Thioredoxin family signature 98 106 - -
Gma13g02460 182 PRINTS Thioredoxin family signature 106 115 - -
Gma13g02460 182 PRINTS Thioredoxin family signature 146 157 - -
Gma13g02460 182 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 182 - -
Gma13g02460 182 Gene3D Glutaredoxin 79 182 - -
Gma13g02460 182 PANTHER GEO12009P1 1 182 - -
Gma13g02460 182 Pfam Thioredoxin 79 179 IPR013766 -
Gma13g02460 182 SUPERFAMILY Thioredoxin-like 78 182 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02460 Gma-Chr13 39398056 39400455 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02460 13 39398056 39400455 Gma13g02460 13 39398056 39400455 ECH
Gma13g02460 13 39398056 39400455 Gma12g01406 12 22414049 22417186 PCT
Gma13g02460 13 39398056 39400455 Gma06g02245 06 41896073 41899302 PCT
Gma12g01406 12 22414049 22417186 Gma13g02460 13 39398056 39400455 PCT
Gma06g02245 06 41896073 41899302 Gma13g02460 13 39398056 39400455 PCT