Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02403 ATGCCTCCTTTCCCCAAAACCTTCTACGCTCGCCCTCCACCTCGCAGAACCTCCTTCTTCGTCTTCTCATGCCTCTTCCTCTCCCTCTCCCTCTTCGTTTTCTTCTTCGCTTTTCTCAGACCCCTCCGGGGCCCTCCCTGCCCCAACCGCGTCCCCAGATCGGTTAAAGTTCTCTGGGATCACCGCCTCTCCGGCGACAGCAACAACGCTCCGGTCGAAACCCGACACAAAGTTATGGCCTTTGTGGGAATTCAAACCGGGTTCAGATCCGTGGGGAGGCGCCAATCTCTCAGGAACACTTGGTTTCCTTCCGATCCTCATGGACTTCAAGGCTTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTGTGATTGGTAAAACGAGTGATAGATCGAAGATGTCTGCACTTCAGAAGGAAGTGGCACAATACGATGATTTCATTTTACTGGATATTGAAGAGGAGTACAGTAAGCTCCCATACAAAACGCTGGCTTTCTTCAAAGCTGCTTATGCCCTTTTTGAAGCTGAGTTTTATGTGAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTTTCATTACTACTGGCAAAAGAGAGATCTCACCCTCAGACTTACATAGGATGCATGAAAAAGGGTCCTGTTTTCACTGATCCCAAACTCAAATGGTATGAGCCACTATCTAATTTGCTCGGAAAGGAATATTTTCTTCATGCTTATGGTCCTATATACGCTCTTTCTGCCGATGTTGTATCAAGCTTGGTAGCACTTAAGAATAACAGGCAAATTTTCCGGATGTTCAGCAATGAGGATGTTACAATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAAAataatcttgaactttgtgctcgagagtgcacatccacgtcaattgctGTGTGGGACATTCCAAAGTGTTCAGGTCTCTGTAATCCAGAAAAGAGAATGTTGGAACTGCATCAAAAGGAAAGTTGTACTCAGAGTCCAACTGTGGACTCTGATGAATAG 1017 0.4395 MPPFPKTFYARPPPRRTSFFVFSCLFLSLSLFVFFFAFLRPLRGPPCPNRVPRSVKVLWDHRLSGDSNNAPVETRHKVMAFVGIQTGFRSVGRRQSLRNTWFPSDPHGLQGLEEATGLAFRFVIGKTSDRSKMSALQKEVAQYDDFILLDIEEEYSKLPYKTLAFFKAAYALFEAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSNLLGKEYFLHAYGPIYALSADVVSSLVALKNNRQIFRMFSNEDVTIGAWMLAMNVNHENNLELCARECTSTSIAVWDIPKCSGLCNPEKRMLELHQKESCTQSPTVDSDE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02403 338 Pfam Galactosyltransferase 93 287 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma13g02403 338 PANTHER HEXOSYLTRANSFERASE 3 330 - -
Gma13g02403 338 Gene3D - 71 329 - -
Gma13g02403 338 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 330 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02403 Gma-Chr13 38789067 38793418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02403 1 338 Glycosyltransferase AT3G14960 71.182 4.09e-174 485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02403 13 38789067 38793418 Gma13g02403 13 38789067 38793418 ECH
Gma13g02403 13 38789067 38793418 Gma12g01499 12 31472299 31479863 PCT
Gma12g01499 12 31472299 31479863 Gma13g02403 13 38789067 38793418 PCT