Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02038 ATGGCCGAGGAGTCTCAAGGGATTAAGCTGTTTGGTGCAATGATTACATTGAACCGTGGGGAAGTAAACAAAGGAGAAAAGGGAAGCGAATATGAGAGGGTGGAGAAGAGAGCAGAGAAGATAATACCCTGTCCGAGATGCAAGAGCATGGAAACTAAGTTCTGTTACTTCAATAACTACAACGTTAATCAGCCAAGGCATTTCTGCAAGAGCTGCCAGAGGTACTGGACGGCTGGTGGGGCCCTCCGAAACGTCGCGGTGGGCGCCGGTCGCCGGAAGGTTAAGTCACCGTGCCATGGAGCCGGTGTCTATGAAAGTACTTCTGAAGATGAAAACAAGTTTGAGATGGGTCAGGGACACGTTGCCATGCCCAACACTGGTTTCCGGCAGATTTTTCAGGCCAAGCGGCAGAGGATCACCTCAGCTCAGCATCAAGGTCAATAA 444 0.5045 MAEESQGIKLFGAMITLNRGEVNKGEKGSEYERVEKRAEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAVGAGRRKVKSPCHGAGVYESTSEDENKFEMGQGHVAMPNTGFRQIFQAKRQRITSAQHQGQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02038 147 PANTHER CYCLIC DOF FACTOR 2 4 142 IPR045174 GO:0003700|GO:0006355
Gma13g02038 147 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 4 142 - -
Gma13g02038 147 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Gma13g02038 147 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Gma13g02038 147 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02038 Gma-Chr13 35617069 35619348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02038 3 138 C2C2-Dof Transcription Factor Family AT1G29160 49.390 4.50e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma13g02038 zf-Dof 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02038 - - gmx:100776748 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00777 15 6362810 6364774 Gma13g02038 13 35617069 35619348 GST