Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01772 ATGGAGTCGGAAGGGGAAGCTGGGGCAAAACCAGTGACAGCATTGGGTGCCCAAGTGTGCCAGATTTGTAGTGATGGTGTTGGGAAGACTGTGGATGGTGAACCGTTCGTTGCGTGCGACGTTTGTGCTTTCCCTGTCTGCAGGCCTTGCTATGAGTATGAAAGGAAGGATGGGAATCAGTCTTGCCCCCAGTGCAAAACCCGGTACAAGAGGCACAAGGGAAGTCCTGCAATTCTTGGAGACATGGAAGAGGATGGTGCTCCTGCTGCTGATGGTGCCAGCGACTTCAATTATGATTCAGAAAATCAAAATCAAAACCAAAACCAAAAGCAGAAGATTTCAGAGCGCATGTTGAGCTGGCAATTGACATACTCACGAGGAGAGGAGGTTGGTGCTCCAAATTATGATAAGGATGTTTCTCACAACCACATTCCTCTACTGACCAGTGGACAAGAGGTATCTGGAGAGTTGTCTGCAGCCTCACCCGAGAGGCTCTCAATGGCATCTCCTGCAGTTGGTGGCGGAAAGCGTGTCCATAATATTCCATATTCATCTGACATTAATCAATCTCCAAATATCAGGGCCGGGGATCCAGGATTGGGTAATGTTGCATGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAAGAAAAGAATGTTGTTCCAATGAGCACAGGCCTGGCGGCTTCTGAAAGAGGAGCTGGAGATGTTGATGCTAGTACTGATGTGCTTGTGGATGATTCCTTGTTGAATGATGAAGCTCGACAGCCTCTTTCCAGGAAGGTTTCTATTCCATCATCTAGGATAAATCCATATCGTATGGTCATTATGCTGCGGCTGGTTATCCTTTGCATTTTCTTGCATTATCGGATAACGAATCCAGTGCCCAATGCCTATCCATTGTGGTTGGTATCAGTTATATGTGAGATTTGGTTTGCCATATCTTGGATATTGGATCAATTCCCCAAGTGGCTTCCTGTAAACCGTGAAACATATCTCGACAGGCTTGCACTAAGGTATGATCAAGAAGGAGAACCATCGCAACTAGCTGCTGTTGACATTTTCGTCAGTACTGTTGACCCATTAAAGGAGCCCCCACTTGTGACTGCCAATACCGTACTATCTATTCTTGCAGTTGACTATCCAGTGGATAAGGTCTCCTGCTATGTGTCAGATGATGGTGCTGCTATGTTGACATTTGAAGCACTTGCTGAGACATCAGAATTTGCAAGGAAATGGGTTCCTTTTAGCAAGAAGTATAGCATTGAACCCCGTGCACCTGAGTGGTATTTTGCTCAAAAGATTGACTACTTGAAAGATAAGGTTCATCCATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATATGAGGAGTTTAAAGTTCGTGTTAATGGACTTGTTGCAAAGGCACAGAAAGTTCCTGAAGAAGGATGGGTGATGCAAGATGGTACCCCGTGGCCTGGAAATAACATCAGAGACCATCCAGGAATGATTCAGgttttcttgggccaaagtggaggacttgacactgagggtaatgaacttccacgtttagtctatgtttctcgtgaaaagcgtccagggttccaacatcataagaaagctggtgccatgaatgcacttgttcgagtatctgcagtccttaccaatggacctttcttattgaatcttgattgtgatcactacataaacaacagcaaggccttgagggaagctatgtgctttatgatggatccaaaccttggtaaacatgtttgctatgtccagtttccacagaggtttgatggtattgataggaatgatcgatatgccaatcgtaatacagttttctttgatataaacttgagaggtttggatggcattcaaggtcctgtttatgtgggtactggatgtgtcttcaataggacagctttatatggttatgaacctccTCTTAAACCCAAGCACAAAAAGCCTGGGTTGTTATCATCACTCTGTGGTGGAAATCGGAAGAAGAGTTCAAAATCTAGCAAGAAAGGAACAGACAAGAAAAAATCTAACAAGCATGTTGACCCAACTGTGCCTATTTTTAATCTAGAGGATATAGAAGAAGGAGTAGAAGGCACACCTTTACTTCTCATACATATGTTTTTAGGTACTGGATTTGATGATGAAAAATCACTACTTATGTCACAAATGAGTCTTgagaaaaggtttggtcagtctgctgtctttgttgcctctacgcTTATGGAGAATGGTGGTGTTCCTCAGTCTGCTACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAAACTGATTGGGGAAGTGAGATAGGATGGATTTATGGTTCTGTCACAGAAGATATTCTTACCGGATTTAAGATGCATGCCCGCGGTTGGCGGTCTATATACTGCATGCCTAAGCGCCCAGCGTTTAAAGGTTCTGCTCCCATCAATCTTTCAGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCCGTGGAAATTCTCTTTAGCCGGCACTGTCCCATCTGGTATGGTTATGGTGGAAGGTTGAAGTGGCTTGAAAGGTTTGCATATGTGAACACCACAATCTATCCAGTCACTGCCATTCCCCTACTCATTTATTGTATCTTGCCTGCTGTCTGTTTGCTGACTAACAAGTTCATTATTCCTCAGATCAGTAACCTTGCAAGCATATGGTTCATCTCCCTCTTCCTTTCCATCTTTGCTACTGGAATCCTGGAGATGAGGTGGAGTGGCGTTGGAATCGACGAGTGGTGGAGGAACGAACAGTTTTGGGTCATTGGTGGTGTCTCGGCGCATCTCTTTGCTGTCTTCCAAGGCCTGCTCAAAGTGCTTGCTGGAATTGACACCAACTTTACTGTCACCTCCAAGGCCTCGGACGAAGATGGAGACTTTGCCGAGCTCTACATGTTCAAATGGACCACCCTTCTCATCCCCCCCACAACCCTTCTCATAATAAACATGATTGGGGTGGTTGCCGGCATCTCCTATGCCATCAATAGTGGCTACCAATCTTGGGGACCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATCCATCTATACCCTTTCCTCAAAGGTCTCATGGGGCGCCAAAACAGAACACCGACCATTGTGGTGGTGTGGTCCATTCTTCTTGCATCCATTTTCTCACTCTTGTGGGTTAGAATTGATCCATTCACCACAAGGGTCACTGGTCCTGATGTTGAGGAGTGTGGCATTAACTGCTAG 3276 0.3868 MESEGEAGAKPVTALGAQVCQICSDGVGKTVDGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDMEEDGAPAADGASDFNYDSENQNQNQNQKQKISERMLSWQLTYSRGEEVGAPNYDKDVSHNHIPLLTSGQEVSGELSAASPERLSMASPAVGGGKRVHNIPYSSDINQSPNIRAGDPGLGNVAWKERVDGWKMKQEKNVVPMSTGLAASERGAGDVDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIMLRLVILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRVNGLVAKAQKVPEEGWVMQDGTPWPGNNIRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCGGNRKKSSKSSKKGTDKKKSNKHVDPTVPIFNLEDIEEGVEGTPLLLIHMFLGTGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPVTAIPLLIYCILPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINMIGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEECGINC 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01772 1091 SUPERFAMILY RING/U-box 5 88 - -
Gma13g01772 1091 MobiDBLite consensus disorder prediction 650 684 - -
Gma13g01772 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Gma13g01772 1091 MobiDBLite consensus disorder prediction 76 114 - -
Gma13g01772 1091 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
Gma13g01772 1091 Pfam Cellulose synthase 352 1084 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma13g01772 1091 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 476 643 IPR029044 -
Gma13g01772 1091 PANTHER CELLULOSE SYNTHASE 5 1091 - -
Gma13g01772 1091 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1091 - -
Gma13g01772 1091 SUPERFAMILY Nucleotide-diphospho-sugar transferases 366 892 IPR029044 -
Gma13g01772 1091 MobiDBLite consensus disorder prediction 96 114 - -
Gma13g01772 1091 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01772 Gma-Chr13 32984653 32994443 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01772 13 32984653 32994443 Gma13g01772 13 32984653 32994443 ECH
Gma13g01772 13 32984653 32994443 Gma15g02612 15 54425164 54433884 PCT