Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01740 ATGGCATCAAGCAATCTATTCTTTGATGATATACGGAGCAAAGTCGATGTTGATCCTCCTCAAAATGAAGAGTCAACAGATGTTGGTGAATTATTAAATGATCCTGCCCAAACTGCTCTTAAACCTAATGGGACTGTTTCAAGCAGTGTTCGTGAGCTTTTAGAGTGCCCTGTATGCCTGAATGCCATGTACCCTCCAATCCATCAGTGTTCAAATGGTCACACTATATGCTCAGGTTGCAAACCCAGGGTCCATAACCGGTGCCCTACTTGTAGGCACGAGCTTGGCAATATCAGATGCCTGGCACTGGAGAAAGTGGCTGCGTCTTTGGAACTTCCCTGTAAATATCAAGGTTTTGGGTGCATCGGTATATATCCATATTACAGCAAGCTAAAACATGAATCGCAATGTGCACATAGACCTTACAACTGTCCATATGCTGGTTCGGAATGCTCTATTATGGGTGACATACCCTACCTGGTGGCCCATCTGAAAGATGACCATAAAGTGGACATGCACAATGGTAGCACTTTTAATCATCGCTACGTCAAATCAAATCCACAAGAAGTTGAAAATGCCACATGGATGTTGACGGTCTTCAGCTGCTTTGGTCAGTATTTTTGTCTACATTTTGAAGCTTTTCAACTAGGAATGGCTCCTGTCTACATAGCCTTTTTGCGGTTTATGGGTGATGATGATGAGGCAAAGAATTATAGCTACAGTTTAGAGGTAGGTGGAAATGGGAGGAAGATGATTTGGCAGGGGGTGCCTAGAAGCATCAGGGACAGCCACCGCAAGGTTCGTGACAGTTTTGATGGTCTCATCATTCAGAGGAATATGGCCCTCTTTTTTTCCGGTGGTGACCGGAAGGAATTGAAGCTAAGGGTTACTGGTAGGATCTGGAAAGAACAGTGA 915 0.4426 MASSNLFFDDIRSKVDVDPPQNEESTDVGELLNDPAQTALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQGFGCIGIYPYYSKLKHESQCAHRPYNCPYAGSECSIMGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDDEAKNYSYSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01740 304 CDD RING-HC_SIAHs 54 92 - -
Gma13g01740 304 PANTHER E3 UBIQUITIN-PROTEIN LIGASE DIS1 7 304 - -
Gma13g01740 304 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 165 297 IPR008974 GO:0005515
Gma13g01740 304 ProSiteProfiles Zinc finger RING-type profile. 56 92 IPR001841 -
Gma13g01740 304 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 7 304 - -
Gma13g01740 304 SUPERFAMILY RING/U-box 48 96 - -
Gma13g01740 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 108 IPR013083 -
Gma13g01740 304 Pfam Seven in absentia protein family 98 297 IPR018121 GO:0005737|GO:0006511|GO:0007275
Gma13g01740 304 ProSiteProfiles Zinc finger SIAH-type profile. 109 169 IPR013010 GO:0008270
Gma13g01740 304 SUPERFAMILY TRAF domain-like 109 301 - -
Gma13g01740 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 164 IPR013083 -
Gma13g01740 304 CDD Sina 170 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01740 Gma-Chr13 32610030 32615484 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01740 13 32610030 32615484 Gma13g01740 13 32610030 32615484 ECH
Gma13g01740 13 32610030 32615484 Gma15g02291 15 47943205 47944963 GST
Gma15g02291 15 47943205 47944963 Gma13g01740 13 32610030 32615484 PCT
Gma13g01740 13 32610030 32615484 Gma15g02291 15 47943205 47944963 PCT