Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01732 ATGGTTTTGATTGGGAATCATAACCAATTTGTTGATAGTCTGTGTGCATTTGTGGTCAAGGGTCACTGGGGCGATCTGTCAAAGGTGAAGAATGTTTCTGCTCTCACTTCCTCTACCATTCACCAGGTACTATTGCAGCTCTCACTCTATGGTTATGGGCTCTCTTATTCCTTCCCATTCTTCAAATGGCTTGACTCCATCCCACATTATAGCCATTCCTTGCAATGTTCATGGGCCATGATTCACATCCTTACCGAACATAAGCATTTCAAAACTGCACAACACATGCTTGAAAAAATTGCTCACAAGGATTTTCTTTCATCCCCTTCAGTTTTGACCACTTTGGTGAGGACTCATGACAACCAGGAAGTTAATTCTCAAGTGCTGAGCTGGCTTGTCATACATTATGCCAAGTCAAAGATGACACAGGATGCAATTCAAGTTTTTGAGCAGATGAGGTTGCATGAAGTCAAACCTCATTTGCATGCTTGTACTGTTCTTTTGAATTCCTTGTTGAAGGATGGGGTTACTCACATGGTGTGGAAAATTTACAAGAAAATGGTTCAAGTTGGGGTTGTTCCCAATACATACATTTACAATTGTTTATTCCATGCTTGTTCAAAAGCAGGAGATGTGGAAAGGGCAGAACAGTTATTAAATGAGATGGATGTAAAGGGTTTGCTTCCTGATATCTTCACATACAATACTTTGATATCGTTATATTGCAAGAAAGGTATGCATTATGAGGCTTTATCCATCCAGAACAGAATGGAAAGAGAGGGGATAAACCTTGATATTGTTAGTTATAACTCTCTTATTTATCGATTTTGCAAAGAAGGCAGGATGAGAGAAGCTATGAGGATGTTTAGTGAAATAAAAAATGCAACTCCCAATCATGTGACATATACTACATTGATTGATGGTTATTGTAAAACAAATGAACTGGAAGAAGCTTTGAAAATGCGTGAAATGATGGAGGCTAAGGGATTGTACCCTGGAGTTGTTACTTTTAATTCAATTTTGCGCAAGCTGTGCCAAGATGGCAGGATAAGGGATGCAAACAAACTCTTGAATGAGATGAGTGAACGGAAAATTCAAGCTGACAATATCACATGCAACACACTAATTAATGCTTACTGCAAGATTGGAGATTTGAAATCAGCTTTGAAATTTAAGAACAAGCTGTTAGAAGCTGGTCTAAAACCTGATCCATTTACATATAAGGCACTGATTCATGGGTTCTGCAAGACGAATGAACTAGAAAGGGCAAAGGAGTTAATGTTCAGCATGCTTGATGCTGGATTTACCCCCAGTTATTGCACATACTCATGGATTGTAGATGGCTACAATAAGAAAGACAATATGGATTCAGTTTTAGCACTTCCAGATGAGTTTCTGAGTAGAGGTCTTTGTCTTGATGTTTCAGTATACAGGGCATTGATAAGAAGGTCATGCAAGGTAGAAAGGGTTGAATGTGCTGAAAGGTTATTCAATCATATGGAAGGAAAGGGTATATCAGGTGAAAGTGTTATCTACACCAGTCTTGCATATGCTTATTGGAAAGCGGGGAATGTACGTGCTGCCTCAAGTATGCTAGAAGAGATGGCTAGGAGAAGGTTGATGATCACAGTCAAACTTTATAGATGCTTTAGCACTTCTGATGCTCATGAAAACAAAGTGTCACAGTTCTTCTGGAATCATGTGGTCGATAGGGCATATTGGGATGAAAACGCATCTTCTATGCAGCTAAGTCGTCATGATCAAGCAGGTTTACCAGCAGGAATTTCAACGAGTTGTGAAGGTTACATTGGCTTGAGCATCATACAATTTTCGCATCCTAAAATGCTGTGGAACGTGGTTGATTGTTCAATATCAAGCAGCATCCAGTACGATATGGACTTCAGAGGTGAGGCAAACACACGTTCCAAATCAAGACAGTGCTTTTTGGAATTTCAACTTGAAAGAGTTTGCATCAACAGTATGCCATTTGTGCCCAAGTTCAATGTATCTCACGGTGTTGCATACTTGCATCATCTATTTGATTGTGATGTAACAAAAGCGTGA 2064 0.3939 MVLIGNHNQFVDSLCAFVVKGHWGDLSKVKNVSALTSSTIHQVLLQLSLYGYGLSYSFPFFKWLDSIPHYSHSLQCSWAMIHILTEHKHFKTAQHMLEKIAHKDFLSSPSVLTTLVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKKMVQVGVVPNTYIYNCLFHACSKAGDVERAEQLLNEMDVKGLLPDIFTYNTLISLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYRFCKEGRMREAMRMFSEIKNATPNHVTYTTLIDGYCKTNELEEALKMREMMEAKGLYPGVVTFNSILRKLCQDGRIRDANKLLNEMSERKIQADNITCNTLINAYCKIGDLKSALKFKNKLLEAGLKPDPFTYKALIHGFCKTNELERAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDSVLALPDEFLSRGLCLDVSVYRALIRRSCKVERVECAERLFNHMEGKGISGESVIYTSLAYAYWKAGNVRAASSMLEEMARRRLMITVKLYRCFSTSDAHENKVSQFFWNHVVDRAYWDENASSMQLSRHDQAGLPAGISTSCEGYIGLSIIQFSHPKMLWNVVDCSISSSIQYDMDFRGEANTRSKSRQCFLEFQLERVCINSMPFVPKFNVSHGVAYLHHLFDCDVTKA 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01732 687 Pfam PPR repeat family 332 381 IPR002885 -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 368 402 IPR002885 -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 195 229 IPR002885 -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 333 367 IPR002885 -
Gma13g01732 687 PANTHER ATPASE EXPRESSION PROTEIN 3 6 579 - -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 403 437 IPR002885 -
Gma13g01732 687 Gene3D Tetratricopeptide repeat domain 464 633 IPR011990 GO:0005515
Gma13g01732 687 Pfam PPR repeat 510 539 IPR002885 -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 125 159 IPR002885 -
Gma13g01732 687 Gene3D Tetratricopeptide repeat domain 324 394 IPR011990 GO:0005515
Gma13g01732 687 Gene3D Tetratricopeptide repeat domain 257 323 IPR011990 GO:0005515
Gma13g01732 687 Gene3D Tetratricopeptide repeat domain 25 188 IPR011990 GO:0005515
Gma13g01732 687 Gene3D Tetratricopeptide repeat domain 395 463 IPR011990 GO:0005515
Gma13g01732 687 Gene3D Tetratricopeptide repeat domain 189 256 IPR011990 GO:0005515
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 473 507 IPR002885 -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 230 264 IPR002885 -
Gma13g01732 687 Pfam Pentacotripeptide-repeat region of PRORP 126 286 IPR033443 -
Gma13g01732 687 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 6 579 - -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 265 295 IPR002885 -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 508 542 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 232 265 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 163 196 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 300 333 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 197 231 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 370 403 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 476 506 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 267 293 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 405 438 IPR002885 -
Gma13g01732 687 TIGRFAM PPR: pentatricopeptide repeat domain 335 368 IPR002885 -
Gma13g01732 687 Pfam PPR repeat 468 501 IPR002885 -
Gma13g01732 687 Pfam PPR repeat 399 427 IPR002885 -
Gma13g01732 687 Pfam PPR repeat 294 326 IPR002885 -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 160 194 IPR002885 -
Gma13g01732 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 298 332 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01732 Gma-Chr13 32530984 32535206 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01732 13 32530984 32535206 Gma15g02277 15 47677707 47684700 GST