Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01701 ATGGCTGGTTCAATTGGAAGCGGAGGGAACACAAGCACGGGTGTGGAGTGGCACGTGCGACCTCCAAACCCTAAGAATCCCATCGTCTTCTTCGATGTCACCATCGGTAACATTCCCGCCGGTCGAATCAAGATGGAACTCTTCGCCGATATTGCCCCCAAAACTGCCGAGAATTTCAGAAAACAACCAAACCAAACACCCCTAATATTTTGTTATGATCTGATCTTATACAGGAAAGCAGGACTGCCTGTTGGTTACAAGGGTTGTCAATTTCATAGAGTTATTAAGGATTTTATGATTCAGGCTGGTGATTTTGTAAAGGGAGATGGTAGTGGATGTGTTTCCATCTATGGACTCAAGTTTGATGATGAAAACTTTACGGCCAAACACACTGGTCCTGGCCTTCTGTCGATGGCAAATAGCGGACAAAATACCAATGGCTGTCAGTTCTTTATAACATGTGCAAAATGTGACTGGCTTGACAACAAGCATGTTGTCTTTGGGAGAGTGCTGGGAGATGGTCTTTTGGTTGTCAGGAAGATTGAGAACGTGGCAACCGGACCCAATAACCGGCCAAAATTAGCTTGTGTCATTGCTGAATGTGGTGAAATTAAATCCCTCTTCTTGCTAGGGAAGAACAATAAAAATCAAAGGCAGAACAAAACCGAGCGAGTTGTTGTGACTGACTCAGTGAGTGAGCGAGCGAGCGAGTTACTCATGGCGAACGCGGCGCTTCGGAACGTGAAGGTGCTCCCGAACTCGGCGAATATGGAGGAAGCGCGTCACCGAGTCTTCGAATTCTTCAGAACGGCCTGCAGATCGCTACCTTCCGTTATGGAAATCTACAACCTCTACGACGTCGTTTCCGTCTCCGAACTCCGCTCCTCCGTCGCCTCCCAGATCCGCAACAACATCCACGTCACCGATCCCAAAGTGATCGATATGCTGCTTTTCAAGGGGATGGAAGAGCTGAAGAATGTTGTGGACCATTCAAAGCAGAGGCATCATATTATTGGTCAGTACGTAGTTGGTCGGCAAGTGCAGGATTCAGCCACAAAAGACCCGGACACCTCTACTTTTCTGAAGAATTTCTACAACACCAATTACTTCTGA 1113 0.4717 MAGSIGSGGNTSTGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRKQPNQTPLIFCYDLILYRKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGLKFDDENFTAKHTGPGLLSMANSGQNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEIKSLFLLGKNNKNQRQNKTERVVVTDSVSERASELLMANAALRNVKVLPNSANMEEARHRVFEFFRTACRSLPSVMEIYNLYDVVSVSELRSSVASQIRNNIHVTDPKVIDMLLFKGMEELKNVVDHSKQRHHIIGQYVVGRQVQDSATKDPDTSTFLKNFYNTNYF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01701 370 CDD cyclophilin_ABH_like 27 202 - -
Gma13g01701 370 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 202 IPR002130 GO:0000413|GO:0003755
Gma13g01701 370 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED 23 203 - -
Gma13g01701 370 MobiDBLite consensus disorder prediction 1 20 - -
Gma13g01701 370 CDD Complex1_LYR_NDUFA6_LYRM6 257 333 IPR045299 GO:0005747
Gma13g01701 370 Gene3D - 16 207 IPR029000 -
Gma13g01701 370 SUPERFAMILY Cyclophilin-like 17 205 IPR029000 -
Gma13g01701 370 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 203 IPR002130 GO:0000413|GO:0003755
Gma13g01701 370 MobiDBLite consensus disorder prediction 1 17 - -
Gma13g01701 370 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 203 - -
Gma13g01701 370 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 86 103 IPR020892 GO:0003755|GO:0006457
Gma13g01701 370 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 91 103 IPR002130 GO:0000413|GO:0003755
Gma13g01701 370 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Gma13g01701 370 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 161 IPR002130 GO:0000413|GO:0003755
Gma13g01701 370 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 162 177 IPR002130 GO:0000413|GO:0003755
Gma13g01701 370 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01701 Gma-Chr13 32018448 32028793 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01701 13 32018448 32028793 Gma13g01701 13 32018448 32028793 ECH
Gma13g01701 13 32018448 32028793 Gma15g02239 15 46968250 46971182 GST