Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01697 tgtgtaagagctgatcagtcctcattatcagtaagattgtattaccttcgtaatgggagtgcaagacttggtttctggttaagaggaagggagtacttgcttcctgtgggcattattttgaaggctctcattgacacaactgaccgtgaaatttatgtaaatttgacaagctgctataatgagaagtatgaaaagggaaagggtgctgttgggacccagcttgttggtgaaagggcaaaaataatcttagatgaacttcgagatttgtctcttttcactcgtcttcaatgtctagaatatattggagagcacttccaacctgttatgaatgaacttaagaatgacagttatcctattgtggctgatgctgttttgaaggactgcatattagttcatctggataacaattttgacaaattcaatcttctcatcttcatgttgcagaaacttttctcacttatagatcagacatcggtgccggacaaccctgattccttgcaaaatcatgaggttttactccctggacacctgattacactttatctcaaggaaaaactggaagattggctgcaaaagggaagaaggcttcttctggatgagattgataaaaaaagcaagaaatttgatttcagtgacattgttcaagttaagaaagtcatggataaaaattcaccaaagcaagtcagtacagcagttgaaaacatgttgaaaactggaagattggttacacaaacgggtctagatctgcagcagagggcaggttatacagttcaggctgaaaggctaaattttttacgttttctatcacatttccgtgctgttcatcgaggggcctcatttgctggacttcgtaccacaactgtgcggaagctgttacctgaatcttggggttttctctgccctgtgcacacacctgatggagagccctgtggattgttgaatcatatgacttgcactagtaggataacgtcattctttgattctcaaggaaacattaaagattattttaaaataaaaatgtccatcctaaatgttttattggaggttgggatgacaccatcattgccaaagatatttcttcctggtccacctgaagctcttactgttctcttagatggttgtgttgttggttgtatagcttccagtgaagtggagaaagttgtggctcacatacgagaattaaaagtgtcatctgtcgcagtgattcctgatgatatggaagtaggatatgttcctttgagcatgggtggtgcctatcctggtctctacctgtgcacatccccttctagatttgttcggccagttagaaatatatcaattgcttccgatggaagtgaaaacatagaactcattgggccatttgagcaggtttttatggaaattagatgtcctgatggtggggatggtggaagaaaaagttcatttcctgcaactcacgaagaaattcatccaacagtaatgcttagtgtagttgctaatctcacaccatggtcagatcataatcagagtccacgaaatatgtaccagtgtcagatggcaaagcaaacaatggcattttcttcacaaactattcaacatcgtgcagaccaaaagttatatcatcttcagactcctcagactcccattgtacgcacaagtacatatactaaatacaacattgatgaatttccaacaggcacaaatgctatagttgcagttctggcatatacgggatatgatatggaggatgctatgattctaaataagtcatcagtggagcgtggaatgtttcatggacaaatatatcagacagaaactattgacttaactgaacaagggggaaggtcagaccgatcttcaagaatgttcagaaaaagtaatatagagaaatcagcttgtccgtccattgattcagatggacttccacatgttggtcagatgatacggccagatgaaccctattgtagcatttataatgaagtaacaagttccatacacaccttaaaaagaaagggttctgaagctgtttatgttgactatgttgctgctgatgtaaaaaacaagaagcaccttcagaaggttaacatacgttttcgacatccccggaaccctgttattggtgataaatttagcagcagacatgggcagaaaggtgtttgctctcagctgtggccagatgttgatatgccattttctggaactactgggatgcgcccagatctcattatcaatcctcatgcatttccttccaggatgacaattgctatgcttttggaatctgttgctgctaagGGAGGTAGCTTACGTGGAGAATTTGTAGATGCAACTCCATTTCGAAGTTCGGTTACGAAAGACAGTGGGGAGTCTGATTCAAAATCAGGTTCACTTGTCGATGATCTTGGCCTTCTGCTAAGAGAAAAGGGATTTAATTATCATGGTTTGGAGGTTCTATACAGTGGTGTTTATGGAACAGAACTAACATGTGAGATATTTATTGGACCTGTTTATTATCAGCGGCTGCGTCACATGGTTTCAGACAAATTTCAGGTTCGATCTACTGGCACAATTGACCAGGTCACCCGGCAGCCGATAAAAGGACGAAAGCGTGGTGGGGGAATTCGATTTGGAGAAATGGAACGCGACTCTCTGCTTGCACATGGAGCTGCATATCTTCTGCATGATAGGTTGCACACCTGTTCTGATTATCACATTGCCGATGTTTGTTCACTTTGTGGAAGCATGCTTGCAACAACATTCATCCAACCTCAAAAGCGGCCAGTTCGGGAGATTGGTGGGCTACCCCCTGGAAGAGCTCCGAAAAAGGTCACTTGTCATGCTTGCCAAACGAGTAAGGGCATGGAGACAGTCGCCATGCCCTATGTATTTAGATATTTGGCTGCTGAGTTAGCAGCAATGAATATAAAAATGACTCTTAAGCTCAGTGATGGAGCCGGAGTTGGAGCGTGA 2946 0.1045 CVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDGAGVGA 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01697 981 CDD RNA_pol_B_RPB2 133 972 IPR015712 GO:0003899|GO:0006351|GO:0032549
Gma13g01697 981 Gene3D RNA polymerase alpha subunit dimerisation domain 849 975 - -
Gma13g01697 981 Gene3D - 492 847 IPR037033 GO:0003677|GO:0003899|GO:0006351
Gma13g01697 981 ProSitePatterns RNA polymerases beta chain signature. 700 712 IPR007121 GO:0003677|GO:0003899|GO:0006351
Gma13g01697 981 Gene3D - 522 696 IPR014724 GO:0003899
Gma13g01697 981 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 2 975 - -
Gma13g01697 981 Pfam RNA polymerase Rpb2, domain 6 491 862 IPR007120 GO:0003677|GO:0003899|GO:0006351
Gma13g01697 981 Pfam RNA polymerase Rpb2, domain 7 864 972 IPR007641 GO:0003677|GO:0003899|GO:0006351
Gma13g01697 981 Pfam RNA polymerase Rpb2, domain 2 2 171 IPR007642 GO:0003677|GO:0003899|GO:0006351
Gma13g01697 981 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA2 5 971 - -
Gma13g01697 981 Gene3D - 158 351 - -
Gma13g01697 981 Pfam RNA polymerase Rpb2, domain 3 259 322 IPR007645 GO:0003677|GO:0003899|GO:0006351
Gma13g01697 981 Pfam RNA polymerase I, Rpa2 specific domain 376 433 IPR009674 GO:0003899|GO:0005634|GO:0006351
Gma13g01697 981 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 5 971 IPR015712 GO:0003899|GO:0006351|GO:0032549
Gma13g01697 981 Gene3D RNA polymerase Rpb2, domain 2 1 157 IPR037034 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01697 Gma-Chr13 31950709 31969120 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01697 13 31950709 31969120 Gma13g01697 13 31950709 31969120 ECH