Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01695 ATGAGTCCTCCTCCAGCTGAATCCAACGCCATGGAAGACGGCAAGCCCGAGAATGGCGGCGACCAAGTCGAGTCTCGCTTCTTTGAGTTCTGCAAGAATGGGCTAGCATTGGAAGAGAAAAGCTGTAAAGAAGCAACGAATCTGTTTGGAGAAACCAAGCATATTCTACTGTCAAATTTTTCGTCAATGGGAAACGGAACGTCTGAAGAAGCAGAGAGGTATTGGTTTGCTTTTATTTTGTACTCTGTCAAAAAATTGATCCAGAAAAATGATGAGGGTGAGAAGGAAGACACTGAGAACActgggcttagcttgtgtcgtatattgagagcaacaaagcttaacattgcagattttttcaaagaacttccacagtttgttgttaaggctggtccaactttaagtaatctatatggcacagattgggaaaacaggcttgagGCGAAGGAGATGCATGCCAATGCTATTCACTTGAAGATTCTTAGCAAGTACTATAAACGTGTATTTGGAGAGTTCTTTGTGGCAACTGACACAAATGCTGAAATAAACTCACCTATTACTGTTCATGCATCTGAATATCATCGATTTGGATGGTTGCTTTTCCTGGCACTTCGTGTACATGCTTTCAGCCGTTTCAAAGACTTAGTGACTTGCACTAATGGTTTAATTTCAATCTTGGCCATCTTAATTATTCATGTTCCTACTCGATTTCGGAATTTCAACATTCATGACTCCTCACGCTTTGTTAAGAAAAGTAACAAAGGTGTGGACCTCCTTGCATCACTTTGCAACATATACAACACTTCTGAAGATGAGTTGAGGAAAACCATGGAGAAAGCCAATAATGTAATAGCAGATATATTGAAGAAGCAGCCTTGCTTGGCATCTGAATGTGAAACCGAAAACCTAGAGAATATCGATAAAGATGGTTTGACCTATTTTAAAGACCTGATGGAAGAATCGTCTCTACCTTCTAGTCTAAGTATGTTAGAAAAAGATTATGATTACATGATTCGCAACAAGAGTGAATTGGATGAAAGGTTATTCATTAATGAGGATGACAGTCTATTAGCTTCAGTAAGCTTATCTGGAGGTTCTGTTTCAGCTGGTGGTGTAAAGAGGAAATTTGATTCAATGGCATCACCTGCTAAGACCATTACAAGTCCACTCTCACCACACCGCTCCCCCGCATCACATGCTAATGGCATCCCAGGTAGTGCAAACTCAAAGATGGCGGCCACCCCTGTAAGCACAGCAATGACTACTGCGAAGTGGCTTCGAACTGTCATTTCTCCACTTCCATCAAAGCCCTCGCCAGAGCTGGAACGATTTTTGACATCATGTGATAGAGATGCTACAAGTGATGTGGTTCGCAGAGCACAGATTATATTGCAGGCTATATTTCCTAGTAGTCCTCTCGGAGAACGATGTGTAACTGGAAGCCTGCAAAGTGCAAACCTTATGGACAATATATGGGCCGAACAACGAAGACTGGAAGCACTGAAGTTATACTACAGGGTATTGGAAGCAATGTGCAGAGCAGAAGCCCAAGTACTTCATGCAACTAATTTAACCTCTCTACTTACCAATGAGAGGTTCCATCGGTGTATGCTTGCATGTTCTGCAGAGTTAGTCCTGGCAACTCACAAGACTGTAACAATGTTGTTCCCTGCAGTACTAGAGAGGACTGGAATTACAGCCTTTGATCTTAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCTCTCCCAAGAGAATTGAGAAGACATCTGAATTCATTGGAAGAACGTCTTTTGGAGAGCATGGTATGGGAAAAGGGTTCTTCAATGTATAACTCTTTGGCAGTTGCCAGACCTTCCCTTTCTGCAGAGATAAATCGTCTTGGACTGTTAGCTGAACCAATGCCATCATTGGATGAAATTGCAATGCATATTAACTTCTCTTGTGGAGGACTGCCGCCAGTGCCTACCTTGCCCAAACTTGAAAGCTCTTCAAATCAGAATGGGGATATCAGATCACCAAAGCGAAATGTTTTAATGGAAAGAAATTCTTTCACTTCACCAGTGAAAGATCGCCTTCTTCCCTTTAACAGCCTTAAGTCAAAACTACCCCCACCTCCTTTGCAGTCAGCATTTGCCAGCCCAACAAAGCCAAATCCAGGAGGTGGAGGGGAAACATGTGCAGAAACTGGGATCAACATTTTTTTTGGCAAGATCATTAAGTTGGGAGCAGTCAGAATAAGTGGCATGGTTGAAAGGCTACAGTTATCTCAGCAGATAAGGGAGAATGTATATTCTCTTTTCCAGCGGATCCTTAATCAGTGGACATCTCTCTTTTTCAACCGTCATATTGACCAAATCATCTTGTGTTGTTTCTATGGAGTTGCAAAGATTTCACAACTCAACCTAACTTTTAAGGAGATCGTATACAACTACAGAAAGCAACCACACTGCAAACCACAAGTTTTTCGTAGTGTATTTGTTGATTGGTCATTGGCTCGCCGAAATGGGAGAACAGGACAGGAGCATATTGACATAATTACCTTTTACAATGAAATATTCATTCCTTCTGTAAAGCCACTGCTTGTTGAACTTGGCCCTGCTGGACCAACTACAAAAAGCGACCGAATACCTGAAATTAATAAAAATGATGGCCATTTAGCTCAATGTCCAGGGTCTCCTAAAATATCACCTTTCCCAACCCTTCCTGATATGTCTCCAAAAAAAGTGTCAGCCACACATAACGTATATGTCTCTCCATTACGATCGTCCAAGATGGAGGCTCTAATATCACACAGCTCAAAAAGCTATTATGCATGTGTTGGGGAGAGCACTCATGCATATCAGAGCCCGTCAAAAGACCTGACCGCCATCAATAACCGTTTGAATGGCAACCGGAAGGTGAGAGGTCCCCTCAACTTTGATGATGTTGATATCGGGTTGGTGAGTGACTCTATGGTTGCAAACAGCCTCTATCTGCAGAATGGAAGCTGTGCTTCATCATCAGGTGCACCATTGAAATCAGAGCAACCTGACTCCTAG 3045 0.4036 MSPPPAESNAMEDGKPENGGDQVESRFFEFCKNGLALEEKSCKEATNLFGETKHILLSNFSSMGNGTSEEAERYWFAFILYSVKKLIQKNDEGEKEDTENTGLSLCRILRATKLNIADFFKELPQFVVKAGPTLSNLYGTDWENRLEAKEMHANAIHLKILSKYYKRVFGEFFVATDTNAEINSPITVHASEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPTRFRNFNIHDSSRFVKKSNKGVDLLASLCNIYNTSEDELRKTMEKANNVIADILKKQPCLASECETENLENIDKDGLTYFKDLMEESSLPSSLSMLEKDYDYMIRNKSELDERLFINEDDSLLASVSLSGGSVSAGGVKRKFDSMASPAKTITSPLSPHRSPASHANGIPGSANSKMAATPVSTAMTTAKWLRTVISPLPSKPSPELERFLTSCDRDATSDVVRRAQIILQAIFPSSPLGERCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPSLSAEINRLGLLAEPMPSLDEIAMHINFSCGGLPPVPTLPKLESSSNQNGDIRSPKRNVLMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYSLFQRILNQWTSLFFNRHIDQIILCCFYGVAKISQLNLTFKEIVYNYRKQPHCKPQVFRSVFVDWSLARRNGRTGQEHIDIITFYNEIFIPSVKPLLVELGPAGPTTKSDRIPEINKNDGHLAQCPGSPKISPFPTLPDMSPKKVSATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGPLNFDDVDIGLVSDSMVANSLYLQNGSCASSSGAPLKSEQPDS 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01695 1014 Coils Coil 270 290 - -
Gma13g01695 1014 SUPERFAMILY Cyclin-like 422 617 IPR036915 -
Gma13g01695 1014 MobiDBLite consensus disorder prediction 1 20 - -
Gma13g01695 1014 CDD CYCLIN 751 816 IPR013763 -
Gma13g01695 1014 Pfam Retinoblastoma-associated protein A domain 414 615 IPR002720 GO:0005634|GO:0051726
Gma13g01695 1014 MobiDBLite consensus disorder prediction 702 725 - -
Gma13g01695 1014 PANTHER BNACNNG22930D PROTEIN 19 1001 - -
Gma13g01695 1014 Gene3D - 684 884 - -
Gma13g01695 1014 SUPERFAMILY Cyclin-like 731 872 IPR036915 -
Gma13g01695 1014 MobiDBLite consensus disorder prediction 660 683 - -
Gma13g01695 1014 Gene3D - 193 351 - -
Gma13g01695 1014 Pfam Domain of unknown function (DUF3452) 97 232 IPR024599 -
Gma13g01695 1014 SMART DUF3452_2 86 232 IPR024599 -
Gma13g01695 1014 MobiDBLite consensus disorder prediction 386 409 - -
Gma13g01695 1014 Gene3D - 417 605 - -
Gma13g01695 1014 Pfam Retinoblastoma-associated protein B domain 733 860 IPR002719 GO:0005634|GO:0051726
Gma13g01695 1014 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 19 1001 IPR028309 GO:0006357|GO:0051726
Gma13g01695 1014 SMART RB_A_2 414 615 IPR002720 GO:0005634|GO:0051726
Gma13g01695 1014 MobiDBLite consensus disorder prediction 659 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01695 Gma-Chr13 31915349 31923517 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Gma13g01695 RB_A 5.1e-65 CL0065
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01695 13 31915349 31923517 Gma15g02221 15 46164787 46172397 GST