Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01682 ATGGCATCTTCAAATTCACCATGTGCAGCATGCAAGTTCTTGCGTCGCAAATGCCAACCTGAGTGTGCATTTGCACCATATTTTCCCCCTGACCAGCCTCAAAAGTTTGCAAATGTTCATAGAATTTTTGGGGCAAGCAATGTCACAAAGCTTCTCAACGACTTGCACCCTCACCAACGTGAAGATGCTGTCAATTCCCTTGCTTATGAAGCTGAGATGAGGCTCCGTGACCCTGTCTATGGTTGTGTAGGAGTCATATCACTCTTACAACACCAACTTCGCCAGCTTCAAATGGACCTCTATTGTGCGAAATCCGAGCTCTCGAGGTACCAAAACTTGAGCATCACCACCAATTTGAGCTCTCTAGCTTCCGAGTCCGCGACCACGGCCTATCATCACCATCACCAGAACATGTCTGGTGCTGGTGCTGGTGCCGGCCGTGACCATCATTATCACTATCATCGCCATCATCAGTTCTTTCCAAGGGACCAACACCAACAACAACAAGTGGTGAGAAGCTTTGATGCCGGCAACAACTATGATGCAAGTCTTTTGGCCATGAACATATCCGCCAACTTAGGGCAACTCAACCAGCTTCAGCATCATAGTGCAGCTGGCGGGGGCGACGACCGCAACTGCTCCTAG 645 0.493 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNLSSLASESATTAYHHHHQNMSGAGAGAGRDHHYHYHRHHQFFPRDQHQQQQVVRSFDAGNNYDASLLAMNISANLGQLNQLQHHSAAGGGDDRNCS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01682 214 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Gma13g01682 214 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Gma13g01682 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 180 - -
Gma13g01682 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01682 Gma-Chr13 31796176 31796820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01682 2 211 AS2 family AT1G65620 63.679 4.45e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma13g01682 LOB 2.9e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01682 13 31796176 31796820 Gma15g02192 15 45068811 45069449 GST