Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01672 ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATAATGCAAGCTGATGAGGATGTTGGAAAGATAGCACTCGCTGTGCCTGTTTTAGTTTCTAAAGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTTAGCAGGGTTCCTGACTACAGCCATGGCCATGGCCATGCTGAGGCTGGTCCTGATGATCGGGCCATTGCAAAAAGAAGGAAAGCTGTTGGTGATGATGGTAATGACAGTGATGAAGAGGCTAAGAGGAGCAAGATGCATGAGTTGGGCCACACTGGCAGTACTggtaggggaagaggccgaggtagaggaagaggccgTGGCCGAGGGCGACCACCTTTAAATAGAGAGATATATCATCAGGATGCTGAATCTGAGCCTTGCACTTCTGTTCAGCCAAGCAACCCACAAAATACAAACACAAGTGTTGCAATGGATAGTGGTTCTGAGTCAAAGGAAATACCAAAGGAGCAGAACATTGCAGTTCCTGTTGAAAGCACTGATTCGCTCCGGAACATCGATCTGAATGCCATTACGAATGAAAACGATGACAAAAAGGCTAGCGCAGCAGCGGATGCCTCTGTGCCTGAACCTCCAACAGAGAGCAAGCATGAAGAAATTCCAGGGTGGTCTCTTTCTGATGTGGACAAGATGGCCATTGATTCGCTGCAGCTTGCACAACTTGGTAGGCCACTAGAAGAGGATGAAGAAGACTATGATGAAGAGGAGGGGTAA 864 0.4363 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYSHGHGHAEAGPDDRAIAKRRKAVGDDGNDSDEEAKRSKMHELGHTGSTGRGRGRGRGRGRGRGRPPLNREIYHQDAESEPCTSVQPSNPQNTNTSVAMDSGSESKEIPKEQNIAVPVESTDSLRNIDLNAITNENDDKKASAAADASVPEPPTESKHEEIPGWSLSDVDKMAIDSLQLAQLGRPLEEDEEDYDEEEG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01672 287 SUPERFAMILY Histone-fold 4 99 IPR009072 GO:0046982
Gma13g01672 287 PANTHER HISTONE SUPERFAMILY PROTEIN 1 285 - -
Gma13g01672 287 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 285 - -
Gma13g01672 287 MobiDBLite consensus disorder prediction 111 209 - -
Gma13g01672 287 MobiDBLite consensus disorder prediction 268 287 - -
Gma13g01672 287 MobiDBLite consensus disorder prediction 221 255 - -
Gma13g01672 287 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Gma13g01672 287 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Gma13g01672 287 MobiDBLite consensus disorder prediction 111 137 - -
Gma13g01672 287 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01672 Gma-Chr13 31631192 31640578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01672 1 273 CCAAT-HAP5 Transcription Factor Family AT3G12480 51.864 1.20e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gma13g01672 CBFD_NFYB_HMF 2.1e-19 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01672 13 31631192 31640578 Gma13g01672 13 31631192 31640578 ECH
Gma13g01672 13 31631192 31640578 Gma15g02185 15 44835196 44843754 GST