Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01670 ATGAAAGTGATAGTTAAGAGGCTCTGTTGTGTGGTTCATAGAACAAGTACAGCAACCAATAGAATGTCCCCATCAGTGAAATCAAAATCCAAGTCCCAGGAAAAGGCCCCTGCAAGGGCTGGTCAGGAACAACATAAGACTTCTCCAAAGACTTCCAAGTCTCCAACTCATGGGAGTGGCACTCCTGCTAGTGCACGCAATCCCATGTCGGCAACCTTTCAAACTCCAGAAACCTCATTGGTTGCTTCTTCTACTCTAGTTCATGACAACAGTCAATTCCCAAAACTAGATGATGCTGATGAGCATTCTAGTAGTCCTCAAGGAACGGTGTCTGAGTGTGACTCGGTTTCTAACAGTGGTAGCTGCTCTGGTGAATCAGAAGAGTCTAAAGAGAAGGTAACGGCAACAAGCTCTTCTACTCGGCCAGATAGTATACCTGGTTGTGATAATGATAGAAGGGAGAAGATCCGCTTGAAGAATGAGAGGAAGCACCAGAGGCAGAGGGAAAGGAGAGCGCAAGAGTTGCATGACCGTTGTTGCGGGTACCTAATGTCGAGAAAGCTAGAATCACTTGCGCAGCAGTTAGTGGCAATGGGGTTCTCTTCCGAGCGAGCGACGTTGGCCTTAATGTTAAATGATGGCAAATTAGAGCAATCGGTATCCTGGCTATTTGAAGGGAGTGAAGAATATTCACAACCCAAGGATACTACTAGCCTTGTAAGTGAGGGTGATATGAAAATTGACATAAGTGATGAGCTTGCTCAGATATCTGCCTTGGAGGTGAAGTACAATTGTTCAAAGCAAGAGGTTGAGAGAGTAGTTGTTGCTTGTGAAGGTGATCTTCAAAAGGCAGAAAATACCTTAAAAACACAGAAGCAGGAATCTCCTACGACCCAATTGAAGTCAGAAGATTCTGCTCAAAATAATAATAGTCTGGTGAGATCACAAGGATTACCAGCAGCATCGGTTTCAATGCAGTACAGAGGGAATGAAAGTGACTTCAACCATTACAACAAGGTAGGTGGTTCTGATTCCATGTTCCTGGATGTTGAAACCGGGAATGTACATTCTCTGCAATTGAATCATCCAAACATAACGACTGAGAAAAGATGGAGTGGTGTTCCAGGGTCAATCCCATCTGCTATGTTCGGCATGGCACCATCCATGCAAGCAATGTCTCCATTTGCTAAAATGGAGGGCGGTCGGTCTATTGCCCATACAAACGAAGGAAGAATGATTCAACAAGGACCAGGAAGGGAGCCGGTAATGATGCAACATCCACAATTCACAAATGCCAAACAGAACTCTATGATGTCTTTAAATTCCTTTCCTTCAGGAGCAGCAGGTTGGCATGTAAATAGTATTCCAGGTGCTGACAATGTGAGGCCAAATGGGAAGTTACTACAAACTCAAAGCATAAGAAGTGTGAGTCCAAATCATTTGGAGCAATTTGGTCAAACTCCTTATAAAGAATATTCTCATTTCCTTGGACCAGCAGACTACTCATCTGCTGGAGTGGGTGGTTATTGCAAGCCAATGGGTGCATCATCATCCCCTCCACCTACAATTCCTCCTTGGCATCAAGGTTCATGGAGCACAAGCACGCCTTCACCTTCGCTCACGGTGCCAACTTCCCTTGGACTATTTTCTGGTCATCAGAATGCAGCCAGAACATTCAGCTCACATTCACACATGGATTGGAACGCTGGGGGCTTCATGCCGGAATTTGACTACACCAGCATAGATTGGAGTTTGAATGCGCCATCTTCTTCCGTGTCAGGTGGACTGAGGCTAGGGATCTCTTCAGTGTTGAGAAACAGTTATGGAGATAGGAGGGGCAGTCAATGCGTGAGTGGATTGCAAATGGCTAGGGAAACTTCATCATCTGGTGGATTGAGAGAGTGGACCACTCCTTTTGCTGGGAAGGACATATTCAGTGTTCCTAGGCAGTTTGTTACCTCTCCTCCTATGTAG 1974 0.4534 MKVIVKRLCCVVHRTSTATNRMSPSVKSKSKSQEKAPARAGQEQHKTSPKTSKSPTHGSGTPASARNPMSATFQTPETSLVASSTLVHDNSQFPKLDDADEHSSSPQGTVSECDSVSNSGSCSGESEESKEKVTATSSSTRPDSIPGCDNDRREKIRLKNERKHQRQRERRAQELHDRCCGYLMSRKLESLAQQLVAMGFSSERATLALMLNDGKLEQSVSWLFEGSEEYSQPKDTTSLVSEGDMKIDISDELAQISALEVKYNCSKQEVERVVVACEGDLQKAENTLKTQKQESPTTQLKSEDSAQNNNSLVRSQGLPAASVSMQYRGNESDFNHYNKVGGSDSMFLDVETGNVHSLQLNHPNITTEKRWSGVPGSIPSAMFGMAPSMQAMSPFAKMEGGRSIAHTNEGRMIQQGPGREPVMMQHPQFTNAKQNSMMSLNSFPSGAAGWHVNSIPGADNVRPNGKLLQTQSIRSVSPNHLEQFGQTPYKEYSHFLGPADYSSAGVGGYCKPMGASSSPPPTIPPWHQGSWSTSTPSPSLTVPTSLGLFSGHQNAARTFSSHSHMDWNAGGFMPEFDYTSIDWSLNAPSSSVSGGLRLGISSVLRNSYGDRRGSQCVSGLQMARETSSSGGLREWTTPFAGKDIFSVPRQFVTSPPM 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01670 657 MobiDBLite consensus disorder prediction 44 70 - -
Gma13g01670 657 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 22 657 - -
Gma13g01670 657 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 186 226 IPR015940 -
Gma13g01670 657 Gene3D - 184 232 - -
Gma13g01670 657 SMART uba_6 188 225 IPR015940 -
Gma13g01670 657 MobiDBLite consensus disorder prediction 103 124 - -
Gma13g01670 657 MobiDBLite consensus disorder prediction 16 31 - -
Gma13g01670 657 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 22 657 - -
Gma13g01670 657 Coils Coil 148 168 - -
Gma13g01670 657 Coils Coil 267 294 - -
Gma13g01670 657 SUPERFAMILY UBA-like 189 231 IPR009060 GO:0005515
Gma13g01670 657 MobiDBLite consensus disorder prediction 16 70 - -
Gma13g01670 657 MobiDBLite consensus disorder prediction 91 172 - -
Gma13g01670 657 MobiDBLite consensus disorder prediction 287 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01670 Gma-Chr13 31607638 31611637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01670 28 451 EF-hand Containing Proteins AT5G12120 40.133 4.19e-80 264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01670 13 31607638 31611637 Gma15g02182 15 44705518 44707428 GST