Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01669 ATGGAGGGAAAACTACTCCATGTGTCAACATATTCCTTTGTTTTCCTGCTATTTCTAAGCTTCAAACAACATGTTGTTACAAAGGCACAATCCCCAAACTATGTAGGAGCTGACTGCCAAAACACCACCCAACAAAAAGCTCTCAGCAGTGCATACCAGACCAACCTTAACAGTCTCCTCTCATGGCTCTCCACAGATGCAGCCACAAGCAAAGGCTACAACCACAACAGCTTTGGCAACAACACCCCTGGAGGAGATGATTCTGCTGTGTATGGCCTCTATAATTGCCGCGGCGACGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTACTGCTTCAAGAGAAGTTCTCCAGCGCTGCCCCAATAGAGTATCTGCTATTGTGTTGTATGATTTCTGCATCCTGAGGTACTCTAATGAAAACTTCTTTGGGAATGTCACGGTGTATCCATCATGGCACGCCGTTCAATCGAAAAACGTGTCTAGTAAGGAAGAGATACAAAAGGGTTTGGATTTTATGAGAGGTTTGATCAGAAAAGCAACTGTGGAGACCAATCTGTTGTACTATATGGATGGCTTCAATTTGAGTTCCACTCAGAAAAGGTATGGCTTGGTGCAATGCAGTAGAGATCTCACAAGTGATGGATGCAGAGAGTGTTTGGAGGCTATGTTAGCACAAGTTCCCAAATGTTGTGAACAAAATTTGGGGTGGCAAGTTTTGGCTGCAAGCTGTCTCATAAAGTATGATGATTATATTTTCTACCTTTTTCGCACTCAAGCATCTGATACACAAACAGCCAAAAAAAGGGGTGCTAGTAAGTCAAGAATAATATTGATCATTGGATTAAGTGTGCTGGGGGCATTAGCTTTACTATGTTTCAGTGTTTATTGCTTCTGGTTCAGGAAAAGATCTAGAAGAGGAAGAGGAAAAGATGGAAGGATACCTGATACCATTGATCAATCATCATATCACAATGTTCAAACTGAGGAAACACTTAATGTAGACTTGCCTACAATCCCATTAATCACAATTCTAAAGAGTACTGATAACTTTTCAGAAGCATCTAAGTTAGGGGAAGGTGGATTTGGCCCTGTTTACAAGGGAACTCTACCAGATGGAAGACAAattgcagtgaaaagactctcacaagcttctggtcaaggctcagaggagttcaagaatgaagtgatgtttatagccaaattgcaacattgcaaccttgtaagacttttggcatgctgcttggagggaaaggaaaagatacttgtatatgagtatttgtcgaatgcaagtctcgactttcacctatttgATGAGAGAAAGAAAAGGCAACTTGATTGGAATCTAAGATTAAGCattatcaatggcatagcaaaaggtcttttataccttcatgaggactctagactcaaagttattcatagagatctcaaagctagtaacattctgttagatgatgaaatgaatcccaaaatatcagattttggattagcaagggcatttgaaaaaggccagaaccaggcaaatacaaatcgagtaatgggcacctatggatacatgtctccagagtatgctatggaaggattgttttcagtgaaatctgatgtcttcagctatggagttcttgttctagaaatcatttgtgggaaaaagaacagtggtttctatcTATCAGAATGTGGTCAAAGTCTTACTTTATATgcttggaaaatatgCCAAGGACTTCTTTGTAGCCTTAGCCAATGCAGCTTCTTCCTTTTTCCTCAGACGGGGTGA 1776 0.295 MEGKLLHVSTYSFVFLLFLSFKQHVVTKAQSPNYVGADCQNTTQQKALSSAYQTNLNSLLSWLSTDAATSKGYNHNSFGNNTPGGDDSAVYGLYNCRGDVVGYFCQFCVSTASREVLQRCPNRVSAIVLYDFCILRYSNENFFGNVTVYPSWHAVQSKNVSSKEEIQKGLDFMRGLIRKATVETNLLYYMDGFNLSSTQKRYGLVQCSRDLTSDGCRECLEAMLAQVPKCCEQNLGWQVLAASCLIKYDDYIFYLFRTQASDTQTAKKRGASKSRIILIIGLSVLGALALLCFSVYCFWFRKRSRRGRGKDGRIPDTIDQSSYHNVQTEETLNVDLPTIPLITILKSTDNFSEASKLGEGGFGPVYKGTLPDGRQIAVKRLSQASGQGSEEFKNEVMFIAKLQHCNLVRLLACCLEGKEKILVYEYLSNASLDFHLFDERKKRQLDWNLRLSIINGIAKGLLYLHEDSRLKVIHRDLKASNILLDDEMNPKISDFGLARAFEKGQNQANTNRVMGTYGYMSPEYAMEGLFSVKSDVFSYGVLVLEIICGKKNSGFYLSECGQSLTLYAWKICQGLLCSLSQCSFFLFPQTG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01669 591 SUPERFAMILY Protein kinase-like (PK-like) 324 556 IPR011009 -
Gma13g01669 591 Gene3D - 33 142 IPR038408 -
Gma13g01669 591 Gene3D - 150 253 IPR038408 -
Gma13g01669 591 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 575 - -
Gma13g01669 591 ProSiteProfiles Gnk2-homologous domain profile. 148 253 IPR002902 -
Gma13g01669 591 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 20 575 - -
Gma13g01669 591 Pfam Salt stress response/antifungal 196 251 IPR002902 -
Gma13g01669 591 Pfam Salt stress response/antifungal 39 139 IPR002902 -
Gma13g01669 591 Gene3D Transferase(Phosphotransferase) domain 1 427 577 - -
Gma13g01669 591 Pfam Protein tyrosine and serine/threonine kinase 354 550 IPR001245 GO:0004672|GO:0006468
Gma13g01669 591 ProSiteProfiles Gnk2-homologous domain profile. 34 142 IPR002902 -
Gma13g01669 591 ProSiteProfiles Protein kinase domain profile. 351 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01669 591 Gene3D Phosphorylase Kinase; domain 1 315 426 - -
Gma13g01669 591 SMART serkin_6 351 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01669 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01669 Gma-Chr13 31595417 31599316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01669 13 571 Receptor kinase-like Gene Family AT4G05200 41.840 1.04e-148 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g01669 PK_Tyr_Ser-Thr 6.4e-46 CL0016