LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma13g01656	ATGGAGGGTCTTCAGAAATTCCTTCATTTCTTCTTTGTAGCTTCTCTTCTCATCAGCACTACAGCAATTTCAGATCACACTCCCAAGCCTTATGTTGTTTATATGGGAAATTCATCACCAAACAAAATTGGAGTAGAAAGCCAAATAGCAGAATCATCGCACCTACAGCTATTGTCATTAATTATTCCAAGTGAAGAAAGTGAGAGGATTGCTCTAACCCACCATTTCAGTCATGCCTTTAGTGGCTTCTCTGCAATGCTTACAGAGAGTGAAGCTTCTGCACTGTCTGGTCACGATGGTGTGGTGTCTGTGTTCCCTGATCCAGTGCTTGAGTTACACACAACGCGATCTTGGGATTTCTTGGAATCAGAGTTGGGAATGAAGCCTTATTATAGTCATGGCACTCCCACATTACACAAACACCCATCAACTGATATCATTATTGGTGTTATAGACACAGGGATATGGCCAGAGTCTCCTAGTTTCAGAGATGAGGGTATAGGGGAGATTCCTTCAAAATGGAAAGGTGTTTGCATGGAGGGTCGTGATTTCAAGAAATCCAATTGCAATAGAAAATTGATAGGTGCAAGATACTATAAGATTCAGGCTACATCAGGTGACAACCAGACTCATATAGAAGCAGCCAAAGGTTCCCCTAGAGATACTGTTGGACATGGAACTCACACTGCATCAATAGCAGCTGGTGTTCATGTCAACAATGCTAGTTATTTTGGTTTAGCAAAAGGAACAGCAAGAGGTGGTTCACCTTCTACTAGGATTGCTGCTTATAAAACATGCTCAGATGAAGGATGCTCTGGTGCCACCATACTAAAGGCTATTGATGATGCTGTGAAGGATGGAGTAGATATAATCTCAATCTCTATTGGACTCAGCTCACTGTTCCAGTCAGACTTTTTGAGTGATCCTATAGCCATTGGAGCATTTCATGCAGAACAAAAGGGGGTCCTGGTGGTGTGTTCAGCTGGCAATGATGGTCCTGATCCTTTCACAGTTGTGAACTCTGCACCATGGATATTTACTATTGCAGCTTCTAATATTGATAGGAACTTCCAATCAACTATTGTCCTTGGAAATGGGAAATATCTCCAAGGTACAGGCATTAACTTTTCAAACCTTACTCATTCAAAGATGCATCGTCTCGTCTTTGGAGAGCAAGTAGCTGCCAAATTTGTCCCAGCATCAGAAGCTAGGAACTGTTTTCCTGGATCACTAGATTTCAACAAAACTGCAGGCAACATTGTTGTTTGTGTTAACGATGATCCAAGTGTTTCAAGGCGAATCAAGAAGCTAGTTGTACAAGATGCAAGAGCCGTAGGGATAATACTCATTAATGAGAACAACAAAGATGCTCCCTTTGATGCAGGTGTATTTCCCTTCACTCAGGTTGGCAATCTTGAAGGGCATCAGATCCTAAAATACATAAATTCTACCAAGAACCCAACTGCAACAATTCTTCCAACAACAGAAGTTGCTAGATCTAAGCCTTCACCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCCAGCCTTACAGAAAACATTCTCAAGCCGGATGTCATGGCTCCAGGAGTTGGCATTTTGGCCGCTGTGATTCCCAAAAGTAAGGAACCAGGAAGTGTTCCAATTGGGAAAAAGCCATCCTTGTATGCCATAAAATCTGGTACATCTATGGCTTGCCCACATGTGACAGGTGCAGCAGCATTCATTAAGTCAGTACACAAAAAATGGAGTTCTTCAATGATCAAATCAGCATTGATGACAACAGCTACAAACTACAACAACATGAGGAAGCCTCTTACTAACAGCTCAAACTCCATTGCCGGCCCACATGAAATGGGAGTTGGGGAAATTAATCCACTCAGAGCTCTCAACCCTGGCTTAGTCTTTGAAACAGATGTGGAAGACTATCTCAGATTCCTTTGTTATTTCGGCTATTCACAGAAAATCATAAGGTCAATCTCTGAGACTAACTTCAATTGCCCAAAGAACTCCTCTGAAGACCTTATCTCCAGCGTCAATTACCCATCAATATCTATAAGTACACTTAAAAGGCAACAAAAAGCAAAAGTGATCACAAGAACAGTTACCAATGTTGGATACCTTAATGCCACATACACCGCAAAAGTGCGTGCACCTCAGGGATTGGTTGTGGAGGTCATCCCCAATAAACTTGTGTTTTCTGAGGGTGTTCAAAGAATGACCTATAAAGTCTCATTCTATGGCAAGGAGGCCCATGGTGGATACAATTTTGGGTCTCTAACATGGCTTGATGGTCACCATTATGTTCATACAGTATTTGCTGTCAAAGTTGAATAA	2337	0.4185	MEGLQKFLHFFFVASLLISTTAISDHTPKPYVVYMGNSSPNKIGVESQIAESSHLQLLSLIIPSEESERIALTHHFSHAFSGFSAMLTESEASALSGHDGVVSVFPDPVLELHTTRSWDFLESELGMKPYYSHGTPTLHKHPSTDIIIGVIDTGIWPESPSFRDEGIGEIPSKWKGVCMEGRDFKKSNCNRKLIGARYYKIQATSGDNQTHIEAAKGSPRDTVGHGTHTASIAAGVHVNNASYFGLAKGTARGGSPSTRIAAYKTCSDEGCSGATILKAIDDAVKDGVDIISISIGLSSLFQSDFLSDPIAIGAFHAEQKGVLVVCSAGNDGPDPFTVVNSAPWIFTIAASNIDRNFQSTIVLGNGKYLQGTGINFSNLTHSKMHRLVFGEQVAAKFVPASEARNCFPGSLDFNKTAGNIVVCVNDDPSVSRRIKKLVVQDARAVGIILINENNKDAPFDAGVFPFTQVGNLEGHQILKYINSTKNPTATILPTTEVARSKPSPIVASFSSRGPSSLTENILKPDVMAPGVGILAAVIPKSKEPGSVPIGKKPSLYAIKSGTSMACPHVTGAAAFIKSVHKKWSSSMIKSALMTTATNYNNMRKPLTNSSNSIAGPHEMGVGEINPLRALNPGLVFETDVEDYLRFLCYFGYSQKIIRSISETNFNCPKNSSEDLISSVNYPSISISTLKRQQKAKVITRTVTNVGYLNATYTAKVRAPQGLVVEVIPNKLVFSEGVQRMTYKVSFYGKEAHGGYNFGSLTWLDGHHYVHTVFAVKVE	778

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma13g01656	778	Pfam	Peptidase inhibitor I9	31	113	IPR010259	-
	Gma13g01656	778	CDD	Peptidases_S8_3	110	597	IPR034197	-
	Gma13g01656	778	PRINTS	Subtilisin serine protease family (S8) signature	143	162	IPR015500	-
	Gma13g01656	778	PRINTS	Subtilisin serine protease family (S8) signature	221	234	IPR015500	-
	Gma13g01656	778	PRINTS	Subtilisin serine protease family (S8) signature	560	576	IPR015500	-
	Gma13g01656	778	ProSitePatterns	Serine proteases, subtilase family, serine active site.	561	571	IPR023828	-
	Gma13g01656	778	Pfam	Subtilase family	144	601	IPR000209	GO:0006508\|GO:0008236
	Gma13g01656	778	Gene3D	-	647	777	-	-
	Gma13g01656	778	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	17	113	IPR037045	-
	Gma13g01656	778	Gene3D	-	354	498	-	-
	Gma13g01656	778	Gene3D	Peptidase S8/S53 domain	145	643	IPR036852	GO:0004252\|GO:0006508
	Gma13g01656	778	PANTHER	CUCUMISIN-LIKE	50	775	-	-
	Gma13g01656	778	SUPERFAMILY	Subtilisin-like	136	631	IPR036852	GO:0004252\|GO:0006508
	Gma13g01656	778	CDD	PA_subtilisin_like	360	491	-	-
	Gma13g01656	778	Pfam	Fibronectin type-III domain	679	775	IPR041469	-
	Gma13g01656	778	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	50	775	IPR045051	-
	Gma13g01656	778	ProSiteProfiles	Serine proteases, subtilase domain profile.	117	630	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma13g01656	Gma-Chr13	31401080	31413516	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma13g01656	31	775	Subtilisin-like Serine Gene Family	AT1G20150	42.670	0.0	584

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma13g01656	13	31401080	31413516	Gma15g02154	15	43647708	43659614	GST