Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01650 ATGTCCTCCTTCAAATCTTACGGAAAGGTTGATGAATCCGAGCAAGCAAGGCTCGAAGCTCGCCGCAAAACGGGAAAGCGAGTCACCATCATAGCCCTGTCCACCATAGTCCTCATCGGAGTTGTGTGTGCTGCTGTATTTGGAACCGTTGCTCACAACAACTCAGATAATAATGATGGTGTAAATAGTAATAGTGCACCATTTCTTTCGAATTCAGTGAAGAGTGTTTGTGACCTGACACTTTACAAGGGAGCATGCTACAGCAGCATTGGTCCTCTTGTGCACTCGGGTCAGGTTCGACCTGAGAAGTTGTTCTTGCTGTCTATTGAAGTTGCCCTAGCTGAGGCTTCAAGGGCTGTTGAGTATTTCTCTGAGAAGGGAGTTTTTAATGGCTTGATCAATGTTGATAATAAAACAATGGAAGGCTTTAAGAATTGCAAGGATCTTTTGGGTCTTGCGGTTGATCATTTGAATAGCTCTTTGGCTTCTGGGGGCAAGTCTTCATTGCTTGATGTGTTGGAGGATCTTAGAACTTGGTTGAGTGCTGCAGGTACTTACCAGCAAACCTGCATTGATGGCTTTGGAGAGGCAGGAGAAGCACTGAAGACCAGTGTTGTAAACAATCTAAAAAATTCTACTGAGTTCACCAGTAATAGTCTTGCCATTGTTACTTGGCTCAACAAGGCTGCAAGCACAGTGAACTTGAGGCGCTTGTTGAGTACCACTTTGCCACATCATCATCATATGGTAGAACCAAAGTGGCTTCATTCTAAAGACCGGAAGCTGATTCAAAAAGATGATAATTTGAAGAGAAAAGctgacattgttgtagcaaaagatggcagcgggaaatttaaaacaatcactgctgcactaaaacatgtccctgagaaaagtgacaagaggactgtgatctatgtgaagaagggggtttactatgagaatgtgagggtggagaagactaaatggaatgtcatgatcattggtgatggtatgaatgccacaattgtatctggaagccttaactttgtggatggcaccccaacattttcaactgcaacatttgCTGTGTTTGGGAAGAATTTCATTGCTAGGGACATGGGATTTCGCAACACAGCTGGTCCACAGAAGCACCAGGCAGTGGCACTGATGACAAGTGCTGATCAAGCGGTTTACTACAGGTGCCAAATTGATGCATTTCAGGACTCTCTCTATGCGCATTCCAACCGCCAATTCTACAGAGAATGCAACATTTATGGCACAGTTGATTTCATTTTTGGTAACTCAGCAGTGGTCCTCCAAAACTGCAACATTTTCCCAAGGGTGCCTATGCAGGGCCAGCAGAATACCATAACAGCACAGGGCAAAACTGACCCCAACATGAACACTGGAATTTCAATTCAAAGTTGCAACATTGCACCCTTTGGAGACTTAAGTTCTGTGAAAACATACCTTGGAAGACCCTGGAAGAATTACTCAACTACAGTGTTTATGCAATCCACATTGGGGAGTTTCATTCACCCAAATGGATGGTTACCTTGGGTAGGAGACTCAGCACCAGATACCATATTTTATGCAGAATTTCAGAATGTTGGACCAGGTTCTTCAACAAAGAATAGAGTGAAGTGGAAGGGTTTGAAAACCATTACAAAGAAACAAGCTAGCATGTTTACTGTCAATGCTTTTCTTTCAGGGGAGAAATGGATTACAGCTTCTGGTGCCCCCTTTAAATCTTCAACGTGA 1743 0.3741 MSSFKSYGKVDESEQARLEARRKTGKRVTIIALSTIVLIGVVCAAVFGTVAHNNSDNNDGVNSNSAPFLSNSVKSVCDLTLYKGACYSSIGPLVHSGQVRPEKLFLLSIEVALAEASRAVEYFSEKGVFNGLINVDNKTMEGFKNCKDLLGLAVDHLNSSLASGGKSSLLDVLEDLRTWLSAAGTYQQTCIDGFGEAGEALKTSVVNNLKNSTEFTSNSLAIVTWLNKAASTVNLRRLLSTTLPHHHHMVEPKWLHSKDRKLIQKDDNLKRKADIVVAKDGSGKFKTITAALKHVPEKSDKRTVIYVKKGVYYENVRVEKTKWNVMIIGDGMNATIVSGSLNFVDGTPTFSTATFAVFGKNFIARDMGFRNTAGPQKHQAVALMTSADQAVYYRCQIDAFQDSLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNIFPRVPMQGQQNTITAQGKTDPNMNTGISIQSCNIAPFGDLSSVKTYLGRPWKNYSTTVFMQSTLGSFIHPNGWLPWVGDSAPDTIFYAEFQNVGPGSSTKNRVKWKGLKTITKKQASMFTVNAFLSGEKWITASGAPFKSST 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01650 580 Gene3D - 269 580 IPR012334 -
Gma13g01650 580 SMART PMEI_2 68 222 IPR006501 GO:0004857
Gma13g01650 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 69 226 IPR006501 GO:0004857
Gma13g01650 580 PANTHER PECTINESTERASE 6 578 - -
Gma13g01650 580 SUPERFAMILY Pectin lyase-like 272 576 IPR011050 -
Gma13g01650 580 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Gma13g01650 580 PANTHER PECTINESTERASE 6 578 - -
Gma13g01650 580 Pfam Pectinesterase 274 565 IPR000070 GO:0030599|GO:0042545
Gma13g01650 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 228 IPR035513 -
Gma13g01650 580 Pfam Plant invertase/pectin methylesterase inhibitor 72 222 IPR006501 GO:0004857
Gma13g01650 580 CDD PMEI-like_3 75 228 - -
Gma13g01650 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 226 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01650 Gma-Chr13 31323731 31327709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01650 7 578 Carbohydrate Esterase AT3G10710 56.969 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01650 13 31323731 31327709 Gma15g02149 15 43538759 43541977 GST
Gma06g02791 06 51764356 51767471 Gma13g01650 13 31323731 31327709 PCT
Gma13g01650 13 31323731 31327709 Gma06g02791 06 51764356 51767471 PCT