Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01618 ATGGGCTTGAGCTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAACAAACGTTATTGGAGGCTCAGAATTTGGAACTTCCAAAGCCTAATCTGATGAGGAaacaacaacaacaacaacaacaacaaACTCAGCCGAATTCAGAGTCTTTGAAGTGTCCAAGATGTGACTCTACCAACACAAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGCAAGAGGCACTGGACCAAAGGTGGAACTCTACGCAATGTTCCAGTTGGTGGTGGAAGGAAGAACAAGAGGGTAAGAAAATCAATCACTACTCCAATTACAACATCTTCCACCACAACATCAATCACAACCACCACTTCTACTTGCACTGCCACAGTCACAACCTCAATTGGCAACAACAACAACAACATGGATGCTATGTTGGGTTGTAATAGCCACATGACAATCCAAACTCCTCTTGCGGATGATCACAAAAACATGTCTTCCTCTCTCTACCAAGCTCTAATTCGTCCACCACCTTTGCTGCTACAACAACAGAATCTGATGAACAACACAAGAGACCTAGAAGGCAAAGATTTTGGTATTGGTATTGGTAATGGTAATAATGGTATCTTTCCTAGTTTAACTTTGCCTTTTCCTATTCATCATCAAAGCCAAAGCCTACTCTTCCCTTTCTCAACCTCAAGCAGCTCTTTTGATACCAACCCTTGTTCAGTAGTGTCAACTTCTCTTAGATCCTCCAATGTTTATAACTATGGGGAGGATCAGTTTAAAGCAATAGAGGAACCAACCATCAATAGTACTATTACAACTACTACTATAGTGCCTAGCACCAACAACACACATCATCCATGGGAGATAGCAGCAGCAACAAGTGGTGTTGGCTTGGGAACTTCTTCAAATTCAAACTATTGGAATTGGGAGGATTTTGATTCATTGGTCTCAACTGATCTAAAAGATCCCTGGGATGGTTCAGATATCAAACCTTGA 1011 0.4075 MGLSSKQVSSSGLDWKQTLLEAQNLELPKPNLMRKQQQQQQQQTQPNSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVRKSITTPITTSSTTTSITTTTSTCTATVTTSIGNNNNNMDAMLGCNSHMTIQTPLADDHKNMSSSLYQALIRPPPLLLQQQNLMNNTRDLEGKDFGIGIGNGNNGIFPSLTLPFPIHHQSQSLLFPFSTSSSSFDTNPCSVVSTSLRSSNVYNYGEDQFKAIEEPTINSTITTTTIVPSTNNTHHPWEIAAATSGVGLGTSSNSNYWNWEDFDSLVSTDLKDPWDGSDIKP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01618 336 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Gma13g01618 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 223 IPR045174 GO:0003700|GO:0006355
Gma13g01618 336 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Gma13g01618 336 Pfam Dof domain, zinc finger 50 103 IPR003851 GO:0003677|GO:0006355
Gma13g01618 336 PANTHER OS06G0284500 PROTEIN 36 223 - -
Gma13g01618 336 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01618 Gma-Chr13 30917044 30919058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01618 46 163 C2C2-Dof Transcription Factor Family AT3G45610 47.445 2.74e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma13g01618 zf-Dof 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01618 - - gmx:100791855 570.081