Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01384 ATGGACACCAAGTTTTGCTACTACAATAATTACAATGTCAACCAGCCCCGCCACTTCTGCAATAATTGCCAGAGATACTGGACTGGAGGGGGGACCATGAAGAACATTCATGTAGGTGCTAGTCACAAGAAGAACAAGAGGTTGGCTTCTCACTGGTGTAAGGGAGAGCCAACGAGGGTGGGGGATCTCGTGAAAGAGAATGGGGTAGCGGTAGAGGAAGCAGAGGACGAGGACGATCAGGCCGAGGAAAAAGAAGGTGGAGAGAAAGAGCTAGGTTTTATGAGGGAACCAAGAtaa 297 0.4882 MDTKFCYYNNYNVNQPRHFCNNCQRYWTGGGTMKNIHVGASHKKNKRLASHWCKGEPTRVGDLVKENGVAVEEAEDEDDQAEEKEGGEKELGFMREPR 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01384 98 Pfam Dof domain, zinc finger 1 47 IPR003851 GO:0003677|GO:0006355
Gma13g01384 98 ProSiteProfiles Zinc finger Dof-type profile. 1 47 IPR003851 GO:0003677|GO:0006355
Gma13g01384 98 MobiDBLite consensus disorder prediction 71 98 - -
Gma13g01384 98 PANTHER CYCLIC DOF FACTOR 2 1 52 IPR045174 GO:0003700|GO:0006355
Gma13g01384 98 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01384 Gma-Chr13 28538239 28538535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01384 1 52 C2C2-Dof Transcription Factor Family AT3G47500 71.154 8.05e-25 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma13g01384 zf-Dof 6.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01384 - - cqi:110730436 102.834