Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01721 ATGCCATCAACATCTCTTACCTCGACATGGAGCACCACATTCTCCCCTCGAAGCTCTTCCTCAAAGTCCCCATCTCCTGCTCCTGCATTGAGAACATTCGCAAATCCGTCGCTACTCACTACAAGACCCGCCCCTCTAACACCCTCCTCCATTGTCGACGTTGCCTATGTTGGTCTCGTCTCCTCCGACCAGCTTCGTGAGGCTAACTCCATTTCCGATCCTGATGTGGGCCAAAACCTCGTCGTTCCTCTCCCTTGCACCTGCTTCAACGGCTCCGATAACTCTCTCCCCGCGATTTACCTCTCTTATGTTGTTCGCCCTGTTGATACCCTCGCTGTCGTTGCTGTTAGGTACTTCACTACTTTCACTGATTTGATGAATGTTAATTCCATGGGAAGCACTGCTATCAACGACGGTGATATCCTCGTTATTCCAATACTCGATAATTAA 450 0.4978 MPSTSLTSTWSTTFSPRSSSSKSPSPAPALRTFANPSLLTTRPAPLTPSSIVDVAYVGLVSSDQLREANSISDPDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTLAVVAVRYFTTFTDLMNVNSMGSTAINDGDILVIPILDN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01721 149 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 41 146 - -
Gma12g01721 149 CDD LysM 102 144 IPR018392 -
Gma12g01721 149 ProSiteProfiles LysM domain profile. 101 144 IPR018392 -
Gma12g01721 149 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1 41 146 - -
Gma12g01721 149 SMART LysM_2 102 145 IPR018392 -
Gma12g01721 149 SUPERFAMILY LysM domain 101 145 IPR036779 -
Gma12g01721 149 Gene3D LysM domain 92 149 IPR036779 -
Gma12g01721 149 Pfam LysM domain 103 145 IPR018392 -
Gma12g01721 149 Pfam LysM domain 60 83 IPR018392 -
Gma12g01721 149 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01721 Gma-Chr12 37766990 37767439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01721 49 146 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 61.386 2.25e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01721 - - gsj:114378675 184.882