Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00939 ATGTTAGCGTTGGGTTACAACACCACCGACGCAAACATCACCACGCTGGAGATTTTAGTTTGGGATTCCCCGATGGAGAATTTCCTCGATGACGTTTTCTTCGACCTTTTCGATGTTCTAATAGGAGATCCTTCGAAAGTCCGACGACGCATTCTCGAAATTGTGGATCTTAGATGCACCATACGTGGCACACATTCAGTCCAAGGTTTACCAATCTCCCAAGGTCTTGTACCTACGCGTCATGGTGGTGGAAGCGTAAGACTTGAATATTGCTCCCAATCTACCTCCGTTAACAATGCTAGAAGTAAGGGTGAAGAGCCTACTCACTCTTCCAAATCGACCCCATCGCGCTTCTCACCGCGAACGCCAACAACATCTCTTACCCCAACGTGGAGCACCACATTCTCCCCTCGAAGCTCTTCCTCAAAGTCCCCATCTCCTGCTCTTGCGTCAACGGCATTCGCAAATTCGTCGCTACTCACTACAAGACCCGCCCCTCCGACACCCTCCTTCATCACTGACGTCGCCTATGCCGGCCTCGTCTCCTCCGACCAGCTCCGCGAGGCTAACTCCATTTTCGACCCTTCAGTTCTTGATGTGGGCCAAAACCTCGTCATTCCTCTCCCTTGCACCTGCTTCAATAGCTCCGATAACTCTCTCCCTGCGATTTACCTCTCTTATGTTGTTCGCCTCGTTGACACCCTTGCTGCCATTGCTGCTAGGTACTTCACGATGAATGTTAATGCCATGGGAAGCACTGCTATCAACGACGATGATATCCTCACTGTTCCAATACCTGGTAATTAA 807 0.5019 MLALGYNTTDANITTLEILVWDSPMENFLDDVFFDLFDVLIGDPSKVRRRILEIVDLRCTIRGTHSVQGLPISQGLVPTRHGGGSVRLEYCSQSTSVNNARSKGEEPTHSSKSTPSRFSPRTPTTSLTPTWSTTFSPRSSSSKSPSPALASTAFANSSLLTTRPAPPTPSFITDVAYAGLVSSDQLREANSIFDPSVLDVGQNLVIPLPCTCFNSSDNSLPAIYLSYVVRLVDTLAAIAARYFTMNVNAMGSTAINDDDILTVPIPGN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00939 268 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1 161 266 - -
Gma12g00939 268 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 161 266 - -
Gma12g00939 268 MobiDBLite consensus disorder prediction 111 147 - -
Gma12g00939 268 MobiDBLite consensus disorder prediction 94 147 - -
Gma12g00939 268 Pfam LysM domain 180 207 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00939 Gma-Chr12 9703145 9709056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00939 172 265 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 61.616 4.64e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00939 - - gsj:114378675 238.039