Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00349 ATGGAAGCAGCTCAAGAAGTAGTGGTAAAGGGATCAAAGTGTCAAGACTGTGGGAACCAAGCGAAGAAGGATTGTGAATACTCAAGATGCAGAAGTTGCTGCAAGAACAAAGGCTTTAACTGCCAAACCCATATCAGAAGCACTTGGATTCCTGTGGATAGAAGGCGCCACCAGAAACTGGAGCAGCAACAACCTCTTCAGGGAGACGATACTCCTAAAAGGCACAAGCACAACCCATATTCATCAAGTTTAGAGAAGTTCAAATTTCCAGCTGTTATGAGTTCCATGGCGTCATTCAGCTGCGTTCAGGTGCGTTCTATAGATGGCACGGTCAATGAAATCGCGTATCAAGCAACTGTGAACATTGGAGGACATGTATTTAGTGGTCTTCTTTATGATCAAGGCCCTGAGCAAAGCTTCAATGCTAAGGGTGGCAACATAGGCCCTCTTGATCAACAACAAAATCTCAATCTTTGGAGTGTTTCAATCCACACTACTCGTGATGGTGCAAGTGCAACTATGCCTCCACTATCAGCCACTGCTGCTCAGGAACCATTTTTTCCTCCACCACATCCATTTCCCCTAGCTTCCTTCAGACCTGATATGACATACATGTCACACCCTAAACCTTAA 633 0.4502 MEAAQEVVVKGSKCQDCGNQAKKDCEYSRCRSCCKNKGFNCQTHIRSTWIPVDRRRHQKLEQQQPLQGDDTPKRHKHNPYSSSLEKFKFPAVMSSMASFSCVQVRSIDGTVNEIAYQATVNIGGHVFSGLLYDQGPEQSFNAKGGNIGPLDQQQNLNLWSVSIHTTRDGASATMPPLSATAAQEPFFPPPHPFPLASFRPDMTYMSHPKP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00349 210 MobiDBLite consensus disorder prediction 52 81 - -
Gma12g00349 210 Pfam Domain of unknown function (DUF702) 11 137 - -
Gma12g00349 210 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 13 55 IPR006510 -
Gma12g00349 210 PANTHER BNAC01G23660D PROTEIN 4 199 - -
Gma12g00349 210 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 88 136 IPR006511 -
Gma12g00349 210 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 4 199 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00349 Gma-Chr12 2877924 2879038 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gma12g00349 DUF702 7.2e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00349 12 2877924 2879038 Gma12g00349 12 2877924 2879038 ECH
Gma11g01036 11 8782079 8783164 Gma12g00349 12 2877924 2879038 ECH
Gma04g00260 04 2265079 2281599 Gma12g00349 12 2877924 2879038 ECH
Gma06g00081 06 737531 738502 Gma12g00349 12 2877924 2879038 ECH
Gma16g01234 16 30376485 30378109 Gma12g00349 12 2877924 2879038 ECH
Gma17g02436 17 42323263 42326608 Gma12g00349 12 2877924 2879038 ECH
Gma12g00349 12 2877924 2879038 Gma11g01036 11 8782079 8783164 GST