Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00045 ATGACAATGATGGGAAAGACATTGTTAACATTGTTATTACTGTCCTCAGTTTTCTCAATTGCCTCATCAAGAAGAAGACATTCCAACAACAGCAACATAGATTGGTGGTGCAACCAAACCCCATACCCCGAGACATGCAAATACTACGTGAAACACAGCCACTACCATTACAAACTCAAACACAAATCCGAATTCCGAACAATTCTAGTTCACTTGGCCTTGGAGAGAGCAGTGATCATGCGAAGGAAAGCACGCGAGTTGGGGCGAAATGGTGTCACCAAGAAGCAGAAGTCAGTGTTCCGTGATTGTTTGAAGCTCTATGACAACACCGTTTTCCATCTAAACCGTACCCTTGAAGGCCTTCACGTGAAGAGAAGCTGTTCACCCTTTGATGCACAAACGTGGCTCAGCACGGCTCGCACAAACATTGAAACATGTCAAAACGGGGCCTTAGAACTTGGCGTTCGAGATTCCATGGTTCCCACTGAGAGATGCAATTTGACTGAGATTATAAGCAATGGCTTATTCGTGAATTGGGCTTTCCTGAAGTACAAAGAGGCTCATTACACAGCAGATGCAGaagatggttttccaagatggttttcGATGCATGAGAGGAAGCTGTTGCAGTCTTCTTCTTCAATAAGGGCACATCTAGTGGTGGCCAAAGATGGTTCGGGGCATTTCAGGAGTATCCAAGCTGCTATCAATGCCGCGGCAAGAAGAAGGTTCAAGAGCAGGTTCATTATACATGTTAAGAGAGGAGTTTATAGAGAGAATATTGAGGTTGACAAGACCAATGACAACGTTATGTTGGTCGGTGATGGCATGAGAAATACCATAATAACAAGTGGCAGGAGCGTTCGAGCTGGTTATACCACCTATAGCTCCGCAACAGCAGGAATTGATGGTCTTCACTTCATTGCACGAGACATTACCTTCAGAAACACGGCAGGTCCTCTGAAGGGTCAGGCAGTGGCACTTCGATCAGCCTCTGACCTCTCCGTGTTCTATCGCTGTGCCATTGAGGGCTACCAAGACACCCTCATGGTCCATGCACAACGACAATTTTACAGAGGATGTTACATATATGGAACCGTTGACTTCATATTTGGCAATGCTGCTGTCGTTTTCCAAAACTGTGTGATTCTTGTAAGAAGACCCTTAAATGGGCAAGCAAACATGATCACGGCCCAAGGTCGAGATGACCCATTTCAGAACACCGGGTTTTCAATTCACAATTCTCAGATCAGGGCTGCACCAGACCTCAGGCCCGTTGTTGGCAAGTTCAACACGTTCTTGGGCCGCCCTTGGCAACGATACTCAAGAGTTGTGGTCATGAAATCGTTCTTGGATAGCTTGGTGAGCCCAAGGGGTTGGTCTCCATGGGGGGACTCTAATTTTGCATTGAATACTCTGTATTATGGAGAGTACCGGAACTTTGGGCCCGGTTCATCCACAAGAAACCGGGTACGATGGCCCGGTTTTCATAGAATAAGTAGCCCAGCTGAGGCATCACGATTCACCGTTGCTAACATCCTTGCTGGCCGCACATGGTTGCCTGCCACTGGTGTGCCATTCACTTCTGGCCTTTGA 1596 0.463 MTMMGKTLLTLLLLSSVFSIASSRRRHSNNSNIDWWCNQTPYPETCKYYVKHSHYHYKLKHKSEFRTILVHLALERAVIMRRKARELGRNGVTKKQKSVFRDCLKLYDNTVFHLNRTLEGLHVKRSCSPFDAQTWLSTARTNIETCQNGALELGVRDSMVPTERCNLTEIISNGLFVNWAFLKYKEAHYTADAEDGFPRWFSMHERKLLQSSSSIRAHLVVAKDGSGHFRSIQAAINAAARRRFKSRFIIHVKRGVYRENIEVDKTNDNVMLVGDGMRNTIITSGRSVRAGYTTYSSATAGIDGLHFIARDITFRNTAGPLKGQAVALRSASDLSVFYRCAIEGYQDTLMVHAQRQFYRGCYIYGTVDFIFGNAAVVFQNCVILVRRPLNGQANMITAQGRDDPFQNTGFSIHNSQIRAAPDLRPVVGKFNTFLGRPWQRYSRVVVMKSFLDSLVSPRGWSPWGDSNFALNTLYYGEYRNFGPGSSTRNRVRWPGFHRISSPAEASRFTVANILAGRTWLPATGVPFTSGL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00045 531 PANTHER PECTINESTERASE 1 530 - -
Gma12g00045 531 SMART PMEI_2 28 177 IPR006501 GO:0004857
Gma12g00045 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 178 IPR035513 -
Gma12g00045 531 Pfam Pectinesterase 219 516 IPR000070 GO:0030599|GO:0042545
Gma12g00045 531 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 178 IPR006501 GO:0004857
Gma12g00045 531 ProSitePatterns Pectinesterase signature 2. 363 372 IPR033131 -
Gma12g00045 531 SUPERFAMILY Pectin lyase-like 214 530 IPR011050 -
Gma12g00045 531 Gene3D - 212 531 IPR012334 -
Gma12g00045 531 Pfam Plant invertase/pectin methylesterase inhibitor 32 175 IPR006501 GO:0004857
Gma12g00045 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 179 IPR035513 -
Gma12g00045 531 PANTHER PECTINESTERASE 1 530 - -
Gma12g00045 531 CDD PMEI-like_3 35 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00045 Gma-Chr12 337808 340157 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00045 12 337808 340157 Gma15g02252 15 47139617 47144031 PCT