Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02193 ATGAAGAGGGACCACAAAGATAGCTGCGGCGGCGGCGGCGCCGCCGGAGGGACTGTGAAGGGTGAGTGTTCCTCAATGCAGTCAAACGGGAAGGCGAAGATGTGGGAGGAAGagcaacagcagcagcagcagcaacaacagcaacaacaacaacaggggatgGACGAGTTGCTGGCGGCGTTGGGGTACAAGGTTCGTGCTTCCGACATGGCTGACGTGGCACAGAAGCTGGAGCAGTTGGAGATGGTCATGGGTTGTGCCCAGGAAGACGGAATTTCCCACCTGGCCTCCGACACCGTTCATTACGACCCTACAGATCTCTATTCCTGGGTCCAAAGCATGTTAACCGAACTCAACCCCGAACCCAACAACAACCTCGATCCATCTTCTTTCTTGATCGACAACAACAACAACATCATCAACAGCACAGCCCCTGTTTTCAACGACGATTCCGAATATGACCTCAGAGCCATTCCTGGCATAGCAGCCTACCCTCCTCCTCTTCCTCAAGACAACCACCTCGACGAAATCGAAACGGCTAACAACATCAACAAGCGCCTCAAGCCATCTCCAGCGGAATCAGCAGACTCCGCCGCGTCTGAGCCCACGCGCCATGTCGTCCTCGTTGACCATCAGGAAGCCGGCGTGCGTCTCGTCCACACTCTCCTGGCGTGCGCGGAGGCCGTTCAGCAGGAGAATCTCAAGCTCGCGGACGCGCTCGTCAAGCACGTGGGCATACTCGCGGCTTCCCAAGCCGGCGCCATGAGGAAGGTTGCTTCCTACTTCGCCCAAGCCCTGGCGCGTAGAATCTACGGAATCTTCCCCGAAGAAACCCTCGATTCCTCCTTCTCCGACGTTCTCCACATGCACTTTTACGAGTCTTGCCCTTATCTCAAATTCGCGCACTTCACCGCGAATCAGGCCATCCTCGAAGCCTTCGCCACCGCCGGGAAAGTCCACGTCATCGATTTCGGCCTCAAACAAGGGATGCAGTGGCCGGCACTCATGCAGGCCCTCGCATTACGGCCCGGCGGGCCCCCGACTTTCCGTTTAACCGGAATCGGGCCCCCACAGCCCGACAACACCGACGCGCTGCAGCAGGTGGGCTTGAAATTAGCCCAATTGGCCCAAATCATCGGCGTCCAGTTCGAATTCCGCGGCTTCGTTTGCAACAGCCTCGCGGATCTCGACCCGAATATGCTCGAGATCCGACCCGGGGAAGCCGTGGCGGTGAATTCCGTCTTCGAACTCCACCGCATGCTCGCCCGGTCCGGATCCGTCGACAAGGTCTTGGACACTGTCAAGAAAATTAATCCCCAGATCGTTACCATCGTGGAACAAGAAGCGAACCACAACGGACCGGGTTTTCTAGACCGGTTCACTGAAGCCTTGCATTACTATTCCAGTCTTTTCGACTCGCTTGAGGGTTCGTCTTCTTCTTCGACCGGGTTGGGCTCGCCGAGTCAGGATCTGTTGATGTCCGAGTTGTACCTTGGGAGACAGATTTGCAACGTGGTGGCTTACGAGGGCCCGGACCGGGTCGAGCGGCACGAGACTTTGACTCAGTGGAGGGGGAGATTGGACTCGGCCGGGTTCGACCCGGTTCATCTCGGGTCCAACGCATTCAAGCAAGCGAGTATGCTACTTGCTCTATTCGCAGGCGGTGATGGGTATAGGGTTGAGGAGAATAACGGCTGCCTCATGCTTGGCTGGCACACTAGGCCACTCATCGCTACCTCCGCTTGGAAGCTTCCCTCCTCCAGCGAGTCTAGTGGCTTGACTCAGTGA 1788 0.5576 MKRDHKDSCGGGGAAGGTVKGECSSMQSNGKAKMWEEEQQQQQQQQQQQQQQGMDELLAALGYKVRASDMADVAQKLEQLEMVMGCAQEDGISHLASDTVHYDPTDLYSWVQSMLTELNPEPNNNLDPSSFLIDNNNNIINSTAPVFNDDSEYDLRAIPGIAAYPPPLPQDNHLDEIETANNINKRLKPSPAESADSAASEPTRHVVLVDHQEAGVRLVHTLLACAEAVQQENLKLADALVKHVGILAASQAGAMRKVASYFAQALARRIYGIFPEETLDSSFSDVLHMHFYESCPYLKFAHFTANQAILEAFATAGKVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGLKLAQLAQIIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARSGSVDKVLDTVKKINPQIVTIVEQEANHNGPGFLDRFTEALHYYSSLFDSLEGSSSSSTGLGSPSQDLLMSELYLGRQICNVVAYEGPDRVERHETLTQWRGRLDSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPSSSESSGLTQ 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02193 595 Pfam Transcriptional regulator DELLA protein N terminal 55 122 IPR021914 -
Gma11g02193 595 MobiDBLite consensus disorder prediction 1 51 - -
Gma11g02193 595 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 583 IPR005202 -
Gma11g02193 595 MobiDBLite consensus disorder prediction 21 51 - -
Gma11g02193 595 PANTHER DELLA PROTEIN RGL1 48 583 IPR030006 GO:0003712|GO:0005634
Gma11g02193 595 Pfam GRAS domain family 218 583 IPR005202 -
Gma11g02193 595 Gene3D - 53 118 IPR038088 -
Gma11g02193 595 Coils Coil 32 52 - -
Gma11g02193 595 SMART DELLA_2 55 128 - -
Gma11g02193 595 ProSiteProfiles GRAS family profile. 209 583 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02193 Gma-Chr11 37130863 37132650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02193 56 584 GRAS Transcription Factor Family AT3G03450 65.794 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g02193 GRAS 2.6e-136 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00376 18 3316429 3318586 Gma11g02193 11 37130863 37132650 GST