Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01270 ATGGTTTTCTCCTCTATTCCAGTCTTTGTAGATCCTCCCAATTGGCAGCAGCAACCAAATAACCATCCTCAAGCAAATAATAATGGTGGTGACAACACTCAGCTTCTTCCACCTTTGCCACCACATCAATCTCATGTGGGAGGTTCTGTGGGTTCAATCAGGCCAGGTTCCATGGCAGATCGAGCTAGGCTAGCTAAGTTACCACCACCAGAAGCAGCTCTCAAGTGTCCACGTTGTGATTCCACCAACACTAAATTTTGCTACTTCAACAACTATAGCCTCTCTCAGCCACGCCACTTCTGCAAGACTTGTAGGCGCTATTGGACAAGAGGGGGTGCCCTAAGAAACGTTCCTGTGGGTGGAGGGTGCCGTAGGAACAAGAAGAACAAGAGGAGTAGTCGCTCTAAGTCTCCAGCATCATCGGAGAAACAACAAACACTTTCTGGTTCCACAAGTGCAATAGTCCCCTCTGGTGGAACCACTCATGAACAGATTGGTCATCAGTTGCCACAGCCACAGAACCTTCCCTTCTTGGCTTCTCTTCAGAACCTTAATCGTTATGCTGTTGGAAACATGGGTCTTGGGTTGCGTGAGATTCACGGACAGAACGAGAACATGGGGTTTCAGATTGGTAATTCTTCTGCTGGTGGAGGAATGGATCAGTGGCGCTTGCATCAGCAGGTTCCTTTCTTTAATGGTTTTGAATCAACTTCAGCTGGTTCATACCCTTTTCAAAATGAAGGTATTAACGAAACACCTTCTGGTTTTGGTGGTGACATAACAACGAATTCCAGGGTTTCTCAGATGCCATCGGTTAAAATGGAGGAAAGTGGGGCTTTGAATTTGTCAAGATCAACACTCAATAATGTCTCAGAAAATAACCAGTACTATTCATGGACTGATATGTCAGGTCTTGCTTCTTTTTCTGCTACTCATCTCTTGTAA 945 0.455 MVFSSIPVFVDPPNWQQQPNNHPQANNNGGDNTQLLPPLPPHQSHVGGSVGSIRPGSMADRARLAKLPPPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSSRSKSPASSEKQQTLSGSTSAIVPSGGTTHEQIGHQLPQPQNLPFLASLQNLNRYAVGNMGLGLREIHGQNENMGFQIGNSSAGGGMDQWRLHQQVPFFNGFESTSAGSYPFQNEGINETPSGFGGDITTNSRVSQMPSVKMEESGALNLSRSTLNNVSENNQYYSWTDMSGLASFSATHLL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01270 314 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 309 IPR045174 GO:0003700|GO:0006355
Gma11g01270 314 MobiDBLite consensus disorder prediction 11 56 - -
Gma11g01270 314 MobiDBLite consensus disorder prediction 138 170 - -
Gma11g01270 314 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Gma11g01270 314 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Gma11g01270 314 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 309 - -
Gma11g01270 314 MobiDBLite consensus disorder prediction 118 170 - -
Gma11g01270 314 Pfam Dof domain, zinc finger 73 128 IPR003851 GO:0003677|GO:0006355
Gma11g01270 314 MobiDBLite consensus disorder prediction 11 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01270 Gma-Chr11 10834065 10835697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01270 41 310 C2C2-Dof Transcription Factor Family AT3G55370 44.027 5.88e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma11g01270 zf-Dof 1.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01270 - - gmx:100801154 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01270 11 10834065 10835697 Gma11g01270 11 10834065 10835697 ECH
Gma12g00567 12 4755004 4756686 Gma11g01270 11 10834065 10835697 GST
Gma13g02990 13 44408979 44410619 Gma11g01270 11 10834065 10835697 PCT
Gma15g00376 15 3173919 3175010 Gma11g01270 11 10834065 10835697 PCT
Gma11g01270 11 10834065 10835697 Gma13g02990 13 44408979 44410619 PCT
Gma11g01270 11 10834065 10835697 Gma15g00376 15 3173919 3175010 PCT