Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01032 ATGAAGATCCAGTGTGATGTGTGTCACAATGAAGTTGCTTCCTTTTTCTGCCCCTCTGATGAAGCCTCTCTCTGCCATGCTTGTGATCGCACCATCCACCATGCCAACAAGCTCGCAGACAAACACAAACGCTTCTCCCTTCACCACCCCACTTCCAAAGACTCCCCTCTTTGTGATATCTGTCATGAGAGGCGTGCATATCTTTTTTGCAAAGAGGACAGAGCAATACTATGTAGAGAATGTGATCTTTCTATTCATGGGGTCAACGAACATACCAAGAAACACAACAGGTTTCTTCTCACTGGCGTAAAGATCGGTGCTGATGCTTCAGACCCAACATCACTTTCCTCAAATGACACTGCCATTGAAGAAAGAACAACCTCTAGTTCTAAAATAAACAGACCAATAAGTTCTTTGTCAAATGAGAATATCAGTTCTTCTCCCACGGTTGGAGACAACATGGCTTGTGACACGGGTTCGGTTTCAACTAGCAGCATTTCTGAGTACTTGATTCAGACCATTCCCGGTTACTGCATGGAAGATCTTTTAGATGCTTCATTTGCATCTAATGGTTTATCTAAGGATTATGAGCACCAATCAGCGTTTCAGAACCAAGATGTTCAAGTCAGCATGTGTTCGTTTCCACTGCAAAGTTGGGTACCACAATCTCAAGCTGGATCCCCTCAACTAATTAGCACTACCTCGAATCTTCATCCCCAGATTAATTCTTTAGTTGGAGTAATGGAAATGCCTAAAGCCAAAGCTAGTGAAGGATACTCCAATTGCATATATAATTATGACTACTCAGCTTACAAAGTTCCTTCAATTTGTCCTCCATTGATCAAAAAATGTAAACGCTCTCGTTAA 867 0.421 MKIQCDVCHNEVASFFCPSDEASLCHACDRTIHHANKLADKHKRFSLHHPTSKDSPLCDICHERRAYLFCKEDRAILCRECDLSIHGVNEHTKKHNRFLLTGVKIGADASDPTSLSSNDTAIEERTTSSSKINRPISSLSNENISSSPTVGDNMACDTGSVSTSSISEYLIQTIPGYCMEDLLDASFASNGLSKDYEHQSAFQNQDVQVSMCSFPLQSWVPQSQAGSPQLISTTSNLHPQINSLVGVMEMPKAKASEGYSNCIYNYDYSAYKVPSICPPLIKKCKRSR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01032 288 SMART bboxneu5 4 47 IPR000315 GO:0008270
Gma11g01032 288 SMART bboxneu5 53 100 IPR000315 GO:0008270
Gma11g01032 288 CDD Bbox1_BBX-like 57 100 - -
Gma11g01032 288 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 205 - -
Gma11g01032 288 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 205 - -
Gma11g01032 288 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Gma11g01032 288 Pfam B-box zinc finger 55 93 IPR000315 GO:0008270
Gma11g01032 288 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Gma11g01032 288 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gma11g01032 288 CDD Bbox1_BBX-like 5 47 - -
Gma11g01032 288 MobiDBLite consensus disorder prediction 110 144 - -
Gma11g01032 288 Gene3D Classic Zinc Finger 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01032 Gma-Chr11 8750791 8752292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Gma11g01032 zf-B_box 7.6e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01032 11 8750791 8752292 Gma11g01032 11 8750791 8752292 ECH
Gma11g01032 11 8750791 8752292 Gma11g00680 11 5679949 5683681 ECH
Gma11g01032 11 8750791 8752292 Gma01g01720 01 52898828 52901897 ECH
Gma12g00345 12 2853126 2854430 Gma11g01032 11 8750791 8752292 GST