Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00761 ATGTGCATCCAAATAAACTTCACCCCAACACTCAATGTGTGCTTTGGGAGCTCAAGCTTCACCTGTGTATGCTTTGTGGTGATGGAGAGTGGGTGGAAGCCTGAGGTTGAGATATCACCAAATTGCCCTAGGTGTGGTTCTTCCAACACCAAGTTCTGCTACTACAACAACTACAGCTTAACTCAACCAAGGTACTTTTGCAAGGGGTGCAGAAGGTACTGGACCAAAGGAGGGTCTCTCCGAAATGTGCCTGTTGGAGGTGGCTGCAGGAAGAACAGAAGAGGTAACAAGACCCTATTGAGACAATCCATTGATGGTTTCACTTTCAAAAATTCACTACCACCTTGTGGCAATGTCACAGATCATAATAATAACCCTATTGGGCATTCTTATGATCCTAGAATAAGAACTTCTTCAGCTTCTAGCTCCTCTTCAGTGGTGAGTGATGGACCTCATATTGATCTTGCTCTAGTTTATGCAAATTTCCTCAACCAAAAGCCCAATTCTGAAGCTAGGGTTGAGAGTACTAATCCAGATCAAGTGCAAACAGTTTTTGATCCTTCTCTAGAAAACAATTCAAGGCTATCAAACACAGTTGTTGTTGGACCAAATACTTTGCCTGAAGAACTTGGTCTCACTGGGTGTTTGAATCTTCCTGAACAACAACCACAAACACATTCTAGTGAGGCTAATAATAATCATAACCAAATGTGCTATGGTGAGTTCAACACTATGCAGACACTTCATCAAAAAGATGGAATTGATCAGCAATGTAGTAATCATGGTGGTGGTGCTATGAATTTTGAGCTGCCACCATTGCCTGGTGAAGAGGAAGTCTCACACGATCATCACATGATGTGGTCAAATTCTGAGATGATGATAAATCATCATCATGCATTTCAAGTCACACAACCTCCACTTCTTGGACCTGATGTTCATGATGCAGACTTGTTAATAGGCAATTGGAGCTCCTTTGATTTGCCAAGAGATGCTTCTTTTTCCAGGCCTTGA 1011 0.4214 MCIQINFTPTLNVCFGSSSFTCVCFVVMESGWKPEVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNKTLLRQSIDGFTFKNSLPPCGNVTDHNNNPIGHSYDPRIRTSSASSSSSVVSDGPHIDLALVYANFLNQKPNSEARVESTNPDQVQTVFDPSLENNSRLSNTVVVGPNTLPEELGLTGCLNLPEQQPQTHSSEANNNHNQMCYGEFNTMQTLHQKDGIDQQCSNHGGGAMNFELPPLPGEEEVSHDHHMMWSNSEMMINHHHAFQVTQPPLLGPDVHDADLLIGNWSSFDLPRDASFSRP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00761 336 Pfam Dof domain, zinc finger 41 94 IPR003851 GO:0003677|GO:0006355
Gma10g00761 336 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 28 332 - -
Gma10g00761 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 332 IPR045174 GO:0003700|GO:0006355
Gma10g00761 336 MobiDBLite consensus disorder prediction 122 146 - -
Gma10g00761 336 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Gma10g00761 336 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00761 Gma-Chr10 10052780 10054221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00761 32 331 C2C2-Dof Transcription Factor Family AT3G52440 39.617 3.36e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma10g00761 zf-Dof 5.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00761 - - gmx:100787193 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00761 10 10052780 10054221 Gma10g00761 10 10052780 10054221 ECH
Gma10g00761 10 10052780 10054221 Gma02g01848 02 42677716 42678639 GST
Gma19g01906 19 48244727 48245533 Gma10g00761 10 10052780 10054221 PCT
Gma10g00761 10 10052780 10054221 Gma19g01906 19 48244727 48245533 PCT