Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02439 ATGAAGTTGAGTTGCAATGGGTGTCGCATTCTCCGCAAAGGTTGTGGTGAGGATTGTGCCATAAGGCCATGCCTCGAGTGGATCAACACTCCTCAGGCCCAAGCCAACGCTACCCTCTTCCTTGCCAAATTCTATGGTCGTGCTGGCTTGGTCAACCTCATCGATTCTGCCCCACAACACAATGGACCTGCTGTATTCAAGTCACTATTGTATGAGGCATGTGGGAGAATTGCGAATCCGACATTTGGGTCAGTGGGCTTGTTTTGGACCGGTGAGTGGGCCCAATGCCAAGCTGCCGTTGATGCTGTGCTAGCTGGGTCCCAGATCAAGGTCGTGGGAGCTTCCGATTCGCAGGGGATTGCGACACATGGCGACGAGCATGTTGCCCAAATCCTTGGCATTCGCCACGTGTCCAAAGATGCTGAAATGGACCATGTGAAAGGAAGAGCCAAGAAGATCAAGAGATCTAGGACAGTGATCAAGCCAAAGCCACAAGTGAGTTCAATTGACTCGGCTGCGATGTTGAAGCTGACTTGGAGCCGTGAGCCAGGAAGGTCCGAGGGTGATAGTGAGGAAACTGTGGAAGCTATGTTGGTGAGCCAAAACAAGCCGAGTCGTAATGGTGGAGTTGAGATGGATTTGGATCTCACTCTCGGCTAG 660 0.5197 MKLSCNGCRILRKGCGEDCAIRPCLEWINTPQAQANATLFLAKFYGRAGLVNLIDSAPQHNGPAVFKSLLYEACGRIANPTFGSVGLFWTGEWAQCQAAVDAVLAGSQIKVVGASDSQGIATHGDEHVAQILGIRHVSKDAEMDHVKGRAKKIKRSRTVIKPKPQVSSIDSAAMLKLTWSREPGRSEGDSEETVEAMLVSQNKPSRNGGVEMDLDLTLG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02439 219 PANTHER LOB DOMAIN PROTEIN 1 219 - -
Gma08g02439 219 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gma08g02439 219 MobiDBLite consensus disorder prediction 181 219 - -
Gma08g02439 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 219 - -
Gma08g02439 219 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02439 Gma-Chr8 27550300 27551485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02439 1 218 AS2 family AT3G02550 46.522 2.81e-64 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma08g02439 LOB 8.9e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02439 08 27550300 27551485 Gma08g02439 08 27550300 27551485 ECH
Gma08g02439 08 27550300 27551485 Gma07g00831 07 8845924 8847610 ECH
Gma18g02604 18 60158484 60166287 Gma08g02439 08 27550300 27551485 GST