Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02431 ATGCCTCACATCCTGCCCGATTTCTCAAACTCAGTAAAGCTCAAGTATGCGAAACTTAGCTACCAATACCTCGTGAATCACATCAAAACCCTAACCCTAATCCCCATCATGCTTGGCATCTCCATAGAGACACTTCGCCTAGGCCCAGATGAGATCCTCAACCTTTGGAACTCTCTCCACGTTAACCTTGTCCAAATCTTCTTATCCACCTTCCTCCTCATCATCATAGCCACCATCTACTTCATGTCAAAGCCACGCACGATCTTCCTAGTGGACTACGCGTGCTTCAAGCCCCCCGTCACGTGCCGCGTCCCTTTCGCCACATTCATGGAACACTCAAGACTCATCCTCAAAAACAATCCCAAAAGCGTGGAGTTCCAAATGAGAATTTTAGAACGATCGGGCCTCGGAGAAGAAACGTGCCTTCCCCCAGCAATCCATTACATTCCACCAAAACCAACCATGGAAGCCGCGAGAGGCGAAGCAGAACACGTGGTCTTCTCAGCAGTGGACTCGTTGTTCAAGAAAACGGGTCTCAAACCAAAGGACATAGACATTCTTATAGTGAATTGCAGCCTCTTTTCTCCAACACCATCTTTATCCGCCATGGTGATCAACAAGTACAAACTAAGAAGTAACATCAAGAGCTTCAACCTCTCTGGAATGGGGTGCAGCGCAGGCCTTATTTCCATCGATTTAGCGCGCGATCTTCTTCAAGTTCATCCAAACTCAAATGCCGTCATTGTGAGCACGGAGATCATAACCCCAAACTATTACCAAGGAAACGAGAGGGCAATGCTTCTTCCTAACTGCTTGTTTAGAATGGGTGGCGCCGCCATTCTCTTATCAAACAGAAAACAAGAACGCAAGAGGGCAAAGTACAGATTAGTCCACGTAGTTCGCACCCACAAGGGCTCCAACGAGAAAGCATTCCGTTGCGTGTTTGAGGAGGAAGACAAGGAGGGCAAAGTGGGGATTTCACTCTCCAAGGACCTTATGGCCATAGCTGGAGAAGCATTAAAGTCCAACATAACTTCAATGGGGCCTCTCGTGCTCCCTGCTTCGGAGCAGTTACTTTTCCTTTTAACCCTCATTGGGAGGAAAATCTTTAACCCTAGGTGGAAGCCCTACATCCCTGACTTCAAACAAGCGTTTGAGCATTTTTGCATCCACGCTGGTGGGCGTGCTGTCATTGATGAGTTGCAGAAGAATCTTCAGCTTTCCGCGGAGCACGTCGAGGCTTCGAGGATGACCCTGCACCGGTTTGGGAACACCTCTTCTTCTTCTTTATGGTATGAGCTGAACTACATTGAGTCCAAGGGGAGGATGAAGAGAGGAGATAGGGTTTGGCAGATTGCGTTTGGAAGTGGATTCAAGTGCAACAGTGCTGTGTGGAGGTGTAATAGAAGCATTCAGACACCCTTTGATGGGCCTTGGGCCGATTGCATTGATCGCTACCCTGTTCACATTCCTGAAATTGTTAAGCTCTAG 1491 0.4809 MPHILPDFSNSVKLKYAKLSYQYLVNHIKTLTLIPIMLGISIETLRLGPDEILNLWNSLHVNLVQIFLSTFLLIIIATIYFMSKPRTIFLVDYACFKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPKPTMEAARGEAEHVVFSAVDSLFKKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVIVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRKQERKRAKYRLVHVVRTHKGSNEKAFRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITSMGPLVLPASEQLLFLLTLIGRKIFNPRWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYELNYIESKGRMKRGDRVWQIAFGSGFKCNSAVWRCNRSIQTPFDGPWADCIDRYPVHIPEIVKL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02431 496 PIRSF Very_long_ch_3-ktacl-CoA_syn 7 496 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gma08g02431 496 SUPERFAMILY Thiolase-like 74 291 IPR016039 GO:0016746
Gma08g02431 496 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 384 466 IPR013747 -
Gma08g02431 496 Gene3D - 113 466 IPR016039 GO:0016746
Gma08g02431 496 CDD CHS_like 73 465 - -
Gma08g02431 496 PANTHER 3-KETOACYL-COA SYNTHASE 4 495 - -
Gma08g02431 496 SUPERFAMILY Thiolase-like 273 467 IPR016039 GO:0016746
Gma08g02431 496 PANTHER 3-KETOACYL-COA SYNTHASE 4 495 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gma08g02431 496 Pfam FAE1/Type III polyketide synthase-like protein 80 368 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02431 Gma-Chr8 25666029 25667519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02431 5 496 Miscellaneous Gene Families AT1G25450 79.675 0.0 858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02431 08 25666029 25667519 Gma08g02431 08 25666029 25667519 ECH