Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02420 ATGGCAGCGGCAGCAACGAGAAGCGTGTCGCTGAGGCAAATATTCGCGGAGAGGAGCAAGGAGAGGCTCCTCTCGCGGAAGGACTTGTCGGAGCTGAGGCTAAACGGCAACACCACCGCCACCGCCACCGCCGCGGCCGCTACTCCCCACACCCTCTCGGATCGCGTGGCGCGGTTCGGCGAGGGCGTGGGGAGGTTCTTCCGTGAGCTGCGGGAGATGGCGCGGTCGGATCCGCGGAAGGTGGTGTTCGCGGCGAAGGCGGGGCTGTCGCTGGCGTTGGTTTCGTTGTTCATTTACATCAAGGAGGAGCAGCTCAGCAAGTACTCCATCTGGGCCATTCTCACCGTCGTTGTCGTTTTCGAATTCAGCGTAGGGGCGACTTTGAACAAAGGGTTCAATCGTTCTTTGGGAACAATTTCCGCTGGAGGGCTTGCGCTGGGAATTGCTGAGTTGGCCGTTTTGTCTGGAAAGTTCGAGGAACTTATTATCGTACTATGCATATTTATTGCAGGTTTTTGTGCAAGCTATGTGAAGCTACTGCCTGCAATGAAGACATATGAATATGGCTTTCGTGTGTTTTTGTTGACATTTTGTATTGTATTGGTATCTGGGAGAACTAGCAGGGAATTTTTCTCCACAGCCTTTTACAGATTAATTCTTATTGCAATTGGTGCTAGCATATGCTTGTTTGTAAATATTTTCATATACCCCATCTGGTCTGGGGAGGATCTGCATAAATTGGTGGTGAAAAATTTCAATGGAGTTGCTGCATCTTTAGAAGGCTGTGTTAATGGCTACCTGCAATGTGTTGCATATGAGAGGGTCCCTTCAAAAATTCTTGTTTATCAAGCCTCGGATGATCCACTTTACCGTGGCTATCGAGCAGCAGTTCAATCGTCAAGTCAAGAAGAGTCTTTGGTAGATTTTGCATTATGGGAGCCACCTCATGGTCCATACAAAACATTCAATTATCCTTGGAGAAGCTATGTTAAAGTCAGTGGAGCTTTGAGGCATTGTGCTTTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCACCCCCAGAAAAGAGGCTGGTTTTCAGCATTGAACTTCAGAAGGTTGGCACTGAAGGAGCTAAAGTATTACGCCAACTTGGAAGCAAAGTGGAAAATATGGAAAAGCTAAGCAATGTAGACATACTTTTGAAAGTACATGAAGCAGCTGAGCAATTGCAGATGAAGATTGACCAACAATCATTCCTCCTAGTAAATTCAGAGAGCTGGCAGGCTGCAAAAAAGCCTAAAGAAGTTGAAAATCATGACAATTTGTTGATTGATCTCAAAGACCCTCATGAACACAAACACTCATTGATCTCTTCCCTCAGTGAAACAGGAGTTGATTCAAGACTTAACATAAACATAGAGCCTTCAGTTCCTGAATTGCACATTTCTCAAAGCTTGTTGTCCAACAAAATATCATGGCCACGTCTCTCATTTTATGGAGATAACATGTTACTTGAGCAAGATTCCAAAGTATATGAAAGTGCAAGCTCTCTGTCTTTGGCAACATTTGCTTCCCTTTTAATAGAGTTTGTTGCAAGGCTTCAAAATCTTGTGGATGAATTCCAAGATCTCAGTGAGAAGGCCAATTTCAAAGACCCCTTTAACCCACCAGTGCTGAAGTAG 1677 0.455 MAAAATRSVSLRQIFAERSKERLLSRKDLSELRLNGNTTATATAAAATPHTLSDRVARFGEGVGRFFRELREMARSDPRKVVFAAKAGLSLALVSLFIYIKEEQLSKYSIWAILTVVVVFEFSVGATLNKGFNRSLGTISAGGLALGIAELAVLSGKFEELIIVLCIFIAGFCASYVKLLPAMKTYEYGFRVFLLTFCIVLVSGRTSREFFSTAFYRLILIAIGASICLFVNIFIYPIWSGEDLHKLVVKNFNGVAASLEGCVNGYLQCVAYERVPSKILVYQASDDPLYRGYRAAVQSSSQEESLVDFALWEPPHGPYKTFNYPWRSYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRLVFSIELQKVGTEGAKVLRQLGSKVENMEKLSNVDILLKVHEAAEQLQMKIDQQSFLLVNSESWQAAKKPKEVENHDNLLIDLKDPHEHKHSLISSLSETGVDSRLNINIEPSVPELHISQSLLSNKISWPRLSFYGDNMLLEQDSKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLSEKANFKDPFNPPVLK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02420 558 Pfam Aluminium activated malate transporter 72 543 IPR020966 GO:0015743
Gma08g02420 558 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 10 555 - -
Gma08g02420 558 Coils Coil 525 545 - -
Gma08g02420 558 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 10 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02420 Gma-Chr8 24106234 24111954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02420 16 550 Miscellaneous Gene Families AT1G25480 60.870 0.0 638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02420 08 24106234 24111954 Gma08g02420 08 24106234 24111954 ECH