Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02396 ATGGCTCTGGACCAGCTTTCGAATCCCAACGCCGTTGACGGTGCCGGTAACGGCGCGACGCCGTGCTCCGCTGTGGACGGCGGCATCGAGGACGGGAGGCCGGCTGCGAGGCTGCCGCGGTGGACGCGGCAGGAGATTCTGGTGCTGATTCAGGGAAAGAGCGATGCGGAGAGCCGGTTCAGACCGGGCCGTGGAAGCGGTTCGGCGTTTGGTTCGAGCGAACCGAAATGGGCGTTGGTGTCCTCGTACTGCAAGAAGCACGGCGTGAACCGGGAACCGGTTCAGTGCCGGAAGCGATGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCGCAGGTGAGGGACGAAACGGAGTCGTTTTGGCTCATGAGGAACGATTTGAGGAGGGAGAGGAAATTGCCTGGGTATTTTGACAGGGAAGTTTACAATATTCTCGATTCGCCGTCGTCAACGGCTGCGGCTGCAGCTGCGGCTGCGGCGGCGGAGACTCCGGTGCCGGTGGCGACGGTTGAGGAGGAGGTGCACCTCTATGATAGTAATCGGAGGGTGGGGAGTGAGGATGGGTTATTCTCGGATTCTGAGAAGGACGAGGTTTTGCTTTTAGCTACTACCAAGGATGTTCCTGCACCTGTTCCTATCTCAGAGAAGCAATATCAGCCCCATCTCCAAGGCTGCGAAGGGGAAGGCAACCCTCAAGGTACTACCAATGAGAAACGGGCAAACCCAAATCCAGAAATGGGTTCTACATCTCAAGGGGAACGGAAGAGGAAGTGGTTAGCAACCGATGGAGAGGAGGAAACTTTGCAAAGCCAATTAATTGATGTCTTAGAAAAGAATGGCAAAATGCTACGTGATCAACTTGAAGCTCAGAAACTGAATTTCCAGTTGGATCGTCAACAGCAGAAAGACACTGCAAGTAACATAGTTGCTGTACTAGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTGTAG 993 0.5428 MALDQLSNPNAVDGAGNGATPCSAVDGGIEDGRPAARLPRWTRQEILVLIQGKSDAESRFRPGRGSGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDREVYNILDSPSSTAAAAAAAAAAETPVPVATVEEEVHLYDSNRRVGSEDGLFSDSEKDEVLLLATTKDVPAPVPISEKQYQPHLQGCEGEGNPQGTTNEKRANPNPEMGSTSQGERKRKWLATDGEEETLQSQLIDVLEKNGKMLRDQLEAQKLNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02396 330 CDD GT1 39 111 - -
Gma08g02396 330 MobiDBLite consensus disorder prediction 223 260 - -
Gma08g02396 330 Pfam Myb/SANT-like DNA-binding domain 40 127 IPR044822 -
Gma08g02396 330 MobiDBLite consensus disorder prediction 1 36 - -
Gma08g02396 330 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 330 - -
Gma08g02396 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 330 - -
Gma08g02396 330 Coils Coil 277 308 - -
Gma08g02396 330 MobiDBLite consensus disorder prediction 232 253 - -
Gma08g02396 330 ProSiteProfiles Myb-like domain profile. 33 104 IPR001005 -
Gma08g02396 330 Gene3D - 41 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02396 Gma-Chr8 23697289 23701133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02396 40 112 Trihelix Transcription Factor Family AT1G33240 34.247 5.39e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma08g02396 Myb_DNA-bind_4 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02396 - - gmx:100804601 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02396 08 23697289 23701133 Gma08g02396 08 23697289 23701133 ECH
Gma18g02544 18 59565337 59568956 Gma08g02396 08 23697289 23701133 GST