Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02178 ATGGAGCAAGAACAAGGAGGAGAATGGCAAGATCAAGAGGCAGCAGTAGTTTTTTATGACACTGAATTATGTTCTTCTTCTGATGCTACAGGTGGCAGCACTCCTTGTTTGGTTTCATCAGAAGTTGATGACTTTGTTGATGGCTTCGTCAACATGAATTCAGATGATGCATACTCCATGGTGAATGGTGGAGTCTTTGAATATGTTCCAACCACCTTGGAGGATTCAGAATTGGAGATCCATGAAGCTCTCACAACAACCATGTGGGAGGAAGAGCTGTGGGATGTAGAGACAACCAACAAGCAGAGTTGCTGCTTAGAAGAATTTGGCCTTTGGCAAGTCCTTCAGGAGACGCGCTGTTTTGCCAAAGGATTGAAGTGTAGGTTATCACTTCTTCCTCATAATGTCATTGCAAATGGAACACTCACAAGCATTTCCATGGATGTGCCTTTGATCTCTAGGGAGAATAAGATGGAAGCTTTTCAGCTTCTTTACCAAACCACGCCTTACATTTCCTTTGGTTTCATGGGTGCAAATGAAGTCATATATCAAGCATCACAAGGAAAGAGCTCAATGCACATTGTCGACTTAGGAATGGAGAATACCCTTCAGTGGTCTTCCCTAATTAGGGCCCTTGCTTCAAGGCCTGAGGGCCATCCAACGCTCCGGATCACCGGATTAACCGGCAATGAAGACAACTCAAATCTTCAAACAAGCATGAATGTGCTTGTGGAGGAATCAAGCTCATTGGGAATGCATCTTGAATCACAATTTCTGAGTCTCCAACTCCTTCTCTTCTTACTATGGAGAAGCTGA 816 0.4387 MEQEQGGEWQDQEAAVVFYDTELCSSSDATGGSTPCLVSSEVDDFVDGFVNMNSDDAYSMVNGGVFEYVPTTLEDSELEIHEALTTTMWEEELWDVETTNKQSCCLEEFGLWQVLQETRCFAKGLKCRLSLLPHNVIANGTLTSISMDVPLISRENKMEAFQLLYQTTPYISFGFMGANEVIYQASQGKSSMHIVDLGMENTLQWSSLIRALASRPEGHPTLRITGLTGNEDNSNLQTSMNVLVEESSSLGMHLESQFLSLQLLLFLLWRS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02178 271 ProSiteProfiles GRAS family profile. 1 271 IPR005202 -
Gma08g02178 271 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 119 262 - -
Gma08g02178 271 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 58 - -
Gma08g02178 271 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 119 262 IPR005202 -
Gma08g02178 271 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 58 IPR005202 -
Gma08g02178 271 Pfam GRAS domain family 121 259 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02178 Gma-Chr8 20559687 20560684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02178 164 227 GRAS Transcription Factor Family AT1G14920 45.312 4.60e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma08g02178 GRAS 3.2e-26 CL0063