Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02177 ATGATGGAACAATCGGGGTTCTACAAACAGTTTCAATGCAATACCATGGAACCTAGGAATGAAGAGTTCCAGTCTGGATCTCAATCAGTAATTCAGGACCATATGGATGGCATGCATACTATCAGAAGACCGCCTGACTATAGCATGTCAGATTTTAAACCAGTACTTAATTATTCAATACAGACAGGTGAGGAATTTGCTCTTGAATTCATGCGTGATAGGGTGAATCTCAGGAAGCCCGTATTTTCAAACGTTAGTGATTCCCATTCCAATTACGCAACTGGTTGTATGGAACTGAAAGGCGTCTTAGGAATCAGTCAAGCACCTTCTGAAAGTGGGTCTGACATTTCTATGCTTTCGAAAGCCGAGAAAGGTTCAACAGAGTTTAACAGACAGAGTACTTCATTACATGGAGACAGAAGCAATTATGGGTCAATTAGATCAATACCAAGAACTTCATTGAATCAGGAGAATAGTCGATTTGTACGTGGGTATGGCTCTTCTGTTGGTTCTGACAGCTCATCAACAATGATGAAGTGTCTCTGTAGCTTTGGTGGAAGAATATTACCACGACCAAGTGATGGAAAGCTAAGGTATGTTGGAGGTCAAACTCGTATTATTCGTCTAAGAAAGGACATATCTTGGCAGGAGCTCATGCAGAAAGCATTACCAATCTATAATCTGGTTCATGTACTAAAATATCAACTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTATCCTCTGAAGAGGATTTGCAGAATATGATGGAGGAATGTAATCTTCTAGAAGATAGAGAACGCTCACAAAAGCTTAGGTTGTTTTTGTTCTCATTGAGTGATTTAGAAGATGCTCAGTTTGCTCTCGGTAGCATAGGTGGTGATTCTCAGGTCCAATATGTTCTTGCTGTTAATGCCATGGACTTTGGATCGATAAACAGCTCAACCCCACTAGGTGTCAGTTTTTCAGCAGATGATCTACATGAATTGGAAAGGCAAACTGCGGAGAGGGAAACTTGTAGAGTTACTGTAGAATCTATAGGTGTCAGCAATGCTCCCTTGAGTAATAAATCTGACTCTTCATTGACTATTCATTCTTCACAACCAGTTCTACCAAATGCCTCTAATGCTTATGAAATCAATCGACTGTCTTATGGTGATCAAATGACACAAGTTTGGGATTATAGTCGTCAATATTTTGTTCATCATGGCCTTACTTCCAGTCATAACCCTGTTGTTGGAGAGACTCCTGTTCCTATGGCTCCTCATCTGCTGAACAATCAACAAGGGGTTCTGAATGAAGATAATCTACCTAGTGGATTACAAGTACAAAATTCTCAGTTATCTACAATGCAGGTAAAAAAGATAAGCGATAGTTCAGTTAAACAAGGGAGTGACCCTGGTAAAGTTTTATCCTCAGAAACCCCATCCCCTGCTATCTCACAGCCCTTTGATAGTTGCTTGAAAAGTAATTTTCCTGAAGCATCGGTTGTAGTTACCATGCCTGAGGGGCATCCACCTTCATTGCCTTCAACAAAAAAGGTTCAGCACAAGGATTATGAAGAGGCCTCTTTTACTTCTAGCAGTACATTTGTTCCTTCTTATGTTGATTCCCACACCAATGCAATTGATTTGAGTTGTCTTCATCCTCCTCCACTTCCTGAGAGAGTTTACTATTCAGAAAGAACTCCGAGGGAGCAAGTGGAGTTGCTGAATCGTTCCTCCAAGTCAGATGACACTCACAGTTCTCAAATTCATGTGTCAGATATACTTTCTGATGTCAACCCAGAGGGTCTAACAGAATCTGGTGACAACTTGCATGATGGTAAAATGTTGAATCCAACTGAGGAATTGGGTATTGTGACAAAGCCCTTGCTTGCAGATGGCCATACCATTGACAATGGGTTATCCAAAAATCTAATGAGCAAACCGTTGCCTGATACAAACAGTCTGGTTAAGTCCAAACTTTCTGAGCACACAGATCCTGAGTTGAAGTCAGTGTTGCCCAGCAATGAAGGAACTAAAGATGTTGAAACTGAAAATTATTGTAAAGATAACAACACCAAGCTCTTGGTTGATGAAACCGAAACCAAAGATGGTAAATCAGATCTTCCTGCTTTTCATCATGTTTCGTCTGGTAAGCATCTTGATGATCTAGCATCCAATCTTCCTGAGATTGATTGGGGTGAAGCCTCAGGGAAGGAATCTTGTGATGGCTGTATGGTACAAGAACTACCTGTATTTGTAACTGGGAACATAACCAAAGATGTTTATCAAGATTTCCCTCCAAATGTTGTTTCTGAACAATCTCAAGGTGACATTCTTATTGATATTGATGATCGATTTCCTCGGGAAATACTTTCTGATATGTTTTCTAAAGCAATACTTGGAGAAGATCCCTCCAGTCTACATCCACCGCCTGGAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAACCTAAAAGATGGTCATATTTTCACAAGTTAGCACAAGAAGGGCTTGATAATGTCTCTCTAATTGATCAGGATCATCTTGGTTTTTCACCCGTGATAGTAAAAGCAGGAGATAATAGAACGCATCATGTTACGCCACTAACAACTGATGGACATCCTCTACATCATGAAGATTCCCATCTCAATTTCAATGAAGAAAATCAAGAGGACTTGCATAGAATGATTGCAACTGAAACCACTGTTCTGAAGTCCTATTATAATCAATCCCAACTTAAGGAAAACGAGAGTATGCAGTTTCATGCTATGATGGAAAATCTAAGAATGCAAGAGTCAGAGTTTGAGGATGGCAAATTTGATGCAAATAGCAATCTACCTCCACTTGATCCTTCTTTCGGAGATTTGAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGCTGCGAGAACTAGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAGTGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTAGAGTTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGGCCAGGAGGAACAATGGCCACTGTGGCAGAATATATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTAGTAAACTTGAAAGATCCTTTACGTCCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAACGCAATACCTTGGTTACTGGTGGTGTGCGTGGGACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGAAGCAGCAACAAGGTCTCTGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAAATTCTGACGGGTGAGGAGCCATATGCTAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAACACATTAAGGCCAATCATCCCAAGCAACTGTGATCATGAATGGAGAGCACTAATGGAACAATGTTGGGCACCCAATCCTGCAGCCAGACCATCCTTCACAGAAATTGCCAGTCGTTTGCGCATAATGTCTGCAGCAGCAGCTAGCCAAACCAAAACACAGGGCAATAAAGCATCTAAATGA 3747 0.4081 MMEQSGFYKQFQCNTMEPRNEEFQSGSQSVIQDHMDGMHTIRRPPDYSMSDFKPVLNYSIQTGEEFALEFMRDRVNLRKPVFSNVSDSHSNYATGCMELKGVLGISQAPSESGSDISMLSKAEKGSTEFNRQSTSLHGDRSNYGSIRSIPRTSLNQENSRFVRGYGSSVGSDSSSTMMKCLCSFGGRILPRPSDGKLRYVGGQTRIIRLRKDISWQELMQKALPIYNLVHVLKYQLPGEDLDALVSVSSEEDLQNMMEECNLLEDRERSQKLRLFLFSLSDLEDAQFALGSIGGDSQVQYVLAVNAMDFGSINSSTPLGVSFSADDLHELERQTAERETCRVTVESIGVSNAPLSNKSDSSLTIHSSQPVLPNASNAYEINRLSYGDQMTQVWDYSRQYFVHHGLTSSHNPVVGETPVPMAPHLLNNQQGVLNEDNLPSGLQVQNSQLSTMQVKKISDSSVKQGSDPGKVLSSETPSPAISQPFDSCLKSNFPEASVVVTMPEGHPPSLPSTKKVQHKDYEEASFTSSSTFVPSYVDSHTNAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHSSQIHVSDILSDVNPEGLTESGDNLHDGKMLNPTEELGIVTKPLLADGHTIDNGLSKNLMSKPLPDTNSLVKSKLSEHTDPELKSVLPSNEGTKDVETENYCKDNNTKLLVDETETKDGKSDLPAFHHVSSGKHLDDLASNLPEIDWGEASGKESCDGCMVQELPVFVTGNITKDVYQDFPPNVVSEQSQGDILIDIDDRFPREILSDMFSKAILGEDPSSLHPPPGDGVGLSINMENHEPKRWSYFHKLAQEGLDNVSLIDQDHLGFSPVIVKAGDNRTHHVTPLTTDGHPLHHEDSHLNFNEENQEDLHRMIATETTVLKSYYNQSQLKENESMQFHAMMENLRMQESEFEDGKFDANSNLPPLDPSFGDLSTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPIIPSNCDHEWRALMEQCWAPNPAARPSFTEIASRLRIMSAAAASQTKTQGNKASK 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02177 1248 PRINTS Tyrosine kinase catalytic domain signature 1084 1102 IPR001245 GO:0004672|GO:0006468
Gma08g02177 1248 PRINTS Tyrosine kinase catalytic domain signature 1155 1177 IPR001245 GO:0004672|GO:0006468
Gma08g02177 1248 PRINTS Tyrosine kinase catalytic domain signature 1199 1221 IPR001245 GO:0004672|GO:0006468
Gma08g02177 1248 PRINTS Tyrosine kinase catalytic domain signature 1047 1060 IPR001245 GO:0004672|GO:0006468
Gma08g02177 1248 Pfam Protein tyrosine and serine/threonine kinase 966 1228 IPR001245 GO:0004672|GO:0006468
Gma08g02177 1248 PANTHER SERINE-THREONINE PROTEIN KINASE 97 1248 - -
Gma08g02177 1248 Coils Coil 246 266 - -
Gma08g02177 1248 SMART serkin_6 965 1231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02177 1248 CDD STKc_MAP3K-like 971 1228 - -
Gma08g02177 1248 Gene3D Phosphorylase Kinase; domain 1 958 1052 - -
Gma08g02177 1248 ProSiteProfiles Protein kinase domain profile. 965 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02177 1248 MobiDBLite consensus disorder prediction 657 678 - -
Gma08g02177 1248 Gene3D Transferase(Phosphotransferase) domain 1 1053 1248 - -
Gma08g02177 1248 CDD PB1_UP2 181 277 - -
Gma08g02177 1248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1090 1102 IPR008271 GO:0004672|GO:0006468
Gma08g02177 1248 SUPERFAMILY CAD & PB1 domains 193 281 - -
Gma08g02177 1248 SMART PB1_new 192 279 IPR000270 GO:0005515
Gma08g02177 1248 PANTHER - 97 1248 - -
Gma08g02177 1248 MobiDBLite consensus disorder prediction 454 478 - -
Gma08g02177 1248 Pfam PB1 domain 194 278 IPR000270 GO:0005515
Gma08g02177 1248 ProSitePatterns Protein kinases ATP-binding region signature. 971 996 IPR017441 GO:0005524
Gma08g02177 1248 Gene3D - 196 278 - -
Gma08g02177 1248 SUPERFAMILY Protein kinase-like (PK-like) 955 1228 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02177 Gma-Chr8 20540217 20550389 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gma08g02177 PK_Tyr_Ser-Thr 5.4e-62 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02177 08 20540217 20550389 Gma08g02177 08 20540217 20550389 ECH