Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02172 ATGGCTGTACTATTCCTCTTTTCTCTCCATGCATTGTTTCCATTGGCTGAATTATTTCTAATCCTATATTTTACAGATTCCTCTGCTTCTGAATGGCCACTAAGGGATGACATTCCCTACTGGTTTGATCAGCATGCTTACAACAATGAAGGGCAAGGCTCTCAGGATGAAAAAAGATGGTCATCACATCTCCATTCTTCTCTAACTCAGCTGCATGACTCAAGGCCCTTGTACAGAACATCTTCATATCCTGAGCAGCAACGACAGTTGCAACACCAACTCCAACATTGCTCCAGTGAACCTGTTTCTAACTTGTATGATCAGCATTTTTATGATAGTGAAACTATTGAGGATGGAAAAAGATGGTCATCACACCCACATTCCTCCATTGCCCACTTACAAGAATCAAAGCCCTTGTATAGAACATCATCTTATCCTAACAAGCGACAGGAGCTAACTCATTTTTCTAGTGAACCTATTTTGGTACCAAAATCTTCATTTACTTCCTATCCCTCCTGGTGTACATGTCATTTGAAAATTCCTTTTCATGCTAGTGGAGCTCATGTGGCTTTGCCGTCACAAAATGGTTCTCATTTGTTCAATTCTGCTCTACAGTTGAGTGGATCAATACATGAGTCACATTTTAGTGGAAACAATCCTTGGGTCAACCAATCAGGGTTGTATTCTAGAGATCATCCAAACCTCCTCAGTAATATGTTGCAACAACAATTACACCATCATAGTGGATTATTATCACCTCATTTATTGACCCAATTGCAGCCACAACAACATAGACCGCATCATCCTGGTTCTGATGCAAGTAGCCAAAAGAATGAAAGTGGTTCATTACAATTTAGGTCCAAGTATATGACTAGTGATGAAATTGAGAGTATTCTTAGAATGCAGCTAGCTGTGACTCATTGTAATGATCCCTATGTTGACGACTATTATCACTCAGCTTGTCTTGCTAAAAAAATGGGGGCTAAGTTGAAAAATTCGTTTTGCCCAACACAAATAAAGGAACATCCTCCACGAGTCCATTCCAACACAGATTCCCATGGTTTTCTTCAGGTTGATTCTTTAGGGAGGGTTTCATTCCTGGCCATTCGTCAGCCTCGTGCTCTTCTTGAAGTTGGTCCATCAAACAGTGCCCTTGAGCAGGAGCCTCTGTTTGTAGCCAGAGTCACAGTTGAGGATGGTCTATGTCTTCTTCTTGATGTAGAGGATATTGATAATTTTATGCAGTGTAATCAACTACAAGATGGTAGAACTCAATTAAGACGAAGACGGAAGGTCCTTTTAGAAGGACTAGCAACATCACTCCAACTTGTTGACCCACTGGGAAAGAATGGACACAAAGTTGGGCTTGTATCTATACCCAAAGGGCGTAAACTCCTAGCAAAGTATCTTCAGTTACTTGTTCCTGGTAGTGAGCTTATGCGGATAGTCTGCATGGCCATTTTCCATCATTTGAGACTCTTATTTGGTGGTCTTCCCTCTGATCTGGCAGCTGCAGAGACTACAAGTGACCTTGCTAAGGTTGTTTGTCAGTGTGTTCAAGGAATGGATCTTGGTGCCTTAGGTGCTTGTCTTGCAGCAGTGGTTTGTTCCTCTGAGCAGCCTCCTCTACATCCCCTTGGAAGCACTCCTGGGGACGACGCCTCCCGTATTATAGTATCCGTCCTTGAGAGGACAACTGAACTTTTTACTGATCCACATGGTGCTGGCAGCTATGAAGGGACGCCAAATGTGTCTGCAATTGGATCAGATGCTTCTAAAGCAATCAGTAGGGAAATGCCTGTTAAACTCTTACGAGCAAGTCTTCCTCACACCAATGACCACCAGAGGAAATTACTACTAGATTTTGCTCAGCGGTCTGTGCCCGTGGTTGGATTTAATAGTTATACTGGGAGCAGTAGTGGTCTTGTGAACTCAGAGACTGTGCTAAGTTGA 1953 0.4255 MAVLFLFSLHALFPLAELFLILYFTDSSASEWPLRDDIPYWFDQHAYNNEGQGSQDEKRWSSHLHSSLTQLHDSRPLYRTSSYPEQQRQLQHQLQHCSSEPVSNLYDQHFYDSETIEDGKRWSSHPHSSIAHLQESKPLYRTSSYPNKRQELTHFSSEPILVPKSSFTSYPSWCTCHLKIPFHASGAHVALPSQNGSHLFNSALQLSGSIHESHFSGNNPWVNQSGLYSRDHPNLLSNMLQQQLHHHSGLLSPHLLTQLQPQQHRPHHPGSDASSQKNESGSLQFRSKYMTSDEIESILRMQLAVTHCNDPYVDDYYHSACLAKKMGAKLKNSFCPTQIKEHPPRVHSNTDSHGFLQVDSLGRVSFLAIRQPRALLEVGPSNSALEQEPLFVARVTVEDGLCLLLDVEDIDNFMQCNQLQDGRTQLRRRRKVLLEGLATSLQLVDPLGKNGHKVGLVSIPKGRKLLAKYLQLLVPGSELMRIVCMAIFHHLRLLFGGLPSDLAAAETTSDLAKVVCQCVQGMDLGALGACLAAVVCSSEQPPLHPLGSTPGDDASRIIVSVLERTTELFTDPHGAGSYEGTPNVSAIGSDASKAISREMPVKLLRASLPHTNDHQRKLLLDFAQRSVPVVGFNSYTGSSSGLVNSETVLS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02172 650 MobiDBLite consensus disorder prediction 259 283 - -
Gma08g02172 650 PANTHER PROTEIN PAT1 HOMOLOG 103 269 - -
Gma08g02172 650 PANTHER PROTEIN PAT1 HOMOLOG 26 102 - -
Gma08g02172 650 PANTHER PROTEIN PAT1 HOMOLOG 582 629 - -
Gma08g02172 650 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 103 269 IPR039900 GO:0000290
Gma08g02172 650 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 268 581 IPR039900 GO:0000290
Gma08g02172 650 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 582 629 IPR039900 GO:0000290
Gma08g02172 650 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 26 102 IPR039900 GO:0000290
Gma08g02172 650 PANTHER PROTEIN PAT1 HOMOLOG 268 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02172 Gma-Chr8 20454421 20456792 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01577 08 13943525 13951164 Gma08g02172 08 20454421 20456792 PCT
Gma08g02172 08 20454421 20456792 Gma08g01577 08 13943525 13951164 PCT